RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 HCAR3P49019 387 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 SEMG2Q02383 582 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 MERTKQ12866 999 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 ILKQ13418 452 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 PSMD5Q16401 504 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 SNRNP35Q16560 246 aaKnown RBP3.15□□□□□ -1.91
LINC00557-201ENST00000563184 SMUG1Q53HV7 270 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 SAXO2Q658L1 398 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 PQLC3Q8N755 202 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 OR52E2Q8NGJ4 325 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF382Q96SR6 550 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 TIMM17AQ99595 171 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 LZTS2Q9BRK4 669 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 RSPO3Q9BXY4 272 aaPredicted RBP3.15□□□□□ -1.91
LINC00557-201ENST00000563184 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 BEX1Q9HBH7 125 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 MTFP1Q9UDX5 166 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 SOCS1O15524 211 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 FOXH1O75593 365 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 VAMP5O95183 116 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 ERCC1P07992 297 aaPredicted RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 ERGP11308 486 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 EIF2S2P20042 333 aaKnown RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 RAB3AP20336 220 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 P2RX1P51575 399 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 AVPI1Q5T686 147 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 TTC23LQ6PF05 361 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 MBOAT2Q6ZWT7 520 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 LUZP2Q86TE4 346 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 CALHM1Q8IU99 346 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 LGI3Q8N145 548 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 GABRG1Q8N1C3 465 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 OR4K5Q8NGD3 323 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 OR9G4Q8NGQ1 327 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF461Q8TAF7 563 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 TSEN15Q8WW01 171 aaKnown RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 XPO6Q96QU8 1125 aaKnown RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 CAMK2N2Q96S95 79 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 BPIFA3Q9BQP9 254 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 OR52D1Q9H346 318 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 AGPAT4Q9NRZ5 378 aa3.14□□□□□ -1.91
LINC00557-201ENST00000563184 DDX19AQ9NUU7 478 aaKnown RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 TRMT112Q9UI30 125 aaKnown RBP3.14□□□□□ -1.91
LINC00557-201ENST00000563184 OR6C74A6NCV1 312 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 TEX46H3BTG2 121 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 DNASE2O00115 360 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 BPY2O14599 106 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 SLC9A3R1O14745 358 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 CCNKO75909 580 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 APCSP02743 223 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 OR56A5P0C7T3 313 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 CTRB1P17538 263 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 NPY1RP25929 384 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 VSX2P58304 361 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 LY6EQ16553 131 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 C12orf54Q6X4T0 127 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 CDKL3Q8IVW4 592 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 OFCC1Q8IZS5 231 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF561Q8N587 486 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF615Q8N8J6 731 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 COX18Q8N8Q8 333 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 TTC29Q8NA56 475 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 OR6N1Q8NGY5 312 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 APH1BQ8WW43 257 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 FLYWCH2Q96CP2 140 aaKnown RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF317Q96PQ6 595 aaPredicted RBP3.13□□□□□ -1.91
LINC00557-201ENST00000563184 UCK2Q9BZX2 261 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 TMEM38AQ9H6F2 299 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 VPS37BQ9H9H4 285 aa3.13□□□□□ -1.91
LINC00557-201ENST00000563184 PTPRTO14522 1441 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 IGHV1OR15-9A0A0B4J2B8 117 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 IGKV1-8A0A0C4DH67 115 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 KBTBD11-OT1A0A1B0GTJ5 212 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 SERTM2A0A1B0GWG4 89 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 H7C1H1 209 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 HMMRO75330 724 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 CSNK2A2P19784 350 aaPredicted RBP3.12□□□□□ -1.91
LINC00557-201ENST00000563184 RAB9AP51151 201 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 GBE1Q04446 702 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 C1orf185Q5T7R7 199 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 TMEM53Q6P2H8 277 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 SHISA6Q6ZSJ9 500 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 EIF3MQ7L2H7 374 aaKnown RBP3.12□□□□□ -1.91
LINC00557-201ENST00000563184 RGP1Q92546 391 aaPredicted RBP3.12□□□□□ -1.91
LINC00557-201ENST00000563184 PTX4Q96A99 478 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF488Q96MN9 340 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 C11orf70Q9BRQ4 267 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 SCRT1Q9BWW7 348 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 SLC7A5P2Q9GIP4 190 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 EXO5Q9H790 373 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 ACP6Q9NPH0 428 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 CLN8Q9UBY8 286 aa3.12□□□□□ -1.91
LINC00557-201ENST00000563184 PLA2R1Q13018 1463 aa3.11□□□□□ -1.91
LINC00557-201ENST00000563184 SCN1AP35498 2009 aa3.11□□□□□ -1.91
LINC00557-201ENST00000563184 NVLO15381 856 aaKnown RBP3.11□□□□□ -1.91
LINC00557-201ENST00000563184 DNAJB6O75190 326 aa3.11□□□□□ -1.91
LINC00557-201ENST00000563184 CTAG2O75638 210 aa3.11□□□□□ -1.91
LINC00557-201ENST00000563184 CCNB2O95067 398 aa3.11□□□□□ -1.91
LINC00557-201ENST00000563184 MPZL1O95297 269 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms