RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
SYNM-203ENST00000560674 UBE2MP61081 183 aaKnown RBP11.53□□□□□ -0.56
SYNM-203ENST00000560674 SNRPNP63162 240 aaKnown RBP11.53□□□□□ -0.56
SYNM-203ENST00000560674 EXOSC2Q13868 293 aaKnown RBP11.53□□□□□ -0.56
SYNM-203ENST00000560674 PDZD11Q5EBL8 140 aa11.53□□□□□ -0.56
SYNM-203ENST00000560674 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
SYNM-203ENST00000560674 TCTN3Q6NUS6 607 aa11.53□□□□□ -0.56
SYNM-203ENST00000560674 TMEM179BQ7Z7N9 219 aa11.53□□□□□ -0.56
SYNM-203ENST00000560674 NUP98P52948 1817 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 FABP1P07148 127 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 ADPRHP54922 357 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 RPL18Q07020 188 aaKnown RBP11.52□□□□□ -0.56
SYNM-203ENST00000560674 RUNX2Q13950 521 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 ZNF77Q15935 545 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 LHFPL2Q6ZUX7 228 aa11.52□□□□□ -0.56
SYNM-203ENST00000560674 OR4E1P0C645 316 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TBPP20226 339 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 FABP6P51161 128 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 CORO6Q6QEF8 472 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 TIMM10BQ9Y5J6 103 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 IGHV3-9P01782 118 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TCN2P20062 427 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 FXNQ16595 210 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 ZNF468Q5VIY5 522 aaPredicted RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 OTUD1Q5VV17 481 aaPredicted RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 RPS19BP1Q86WX3 136 aaKnown RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TMEM231Q9H6L2 316 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TNFRSF12AQ9NP84 129 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 KCND3Q9UK17 655 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 MARF1Q9Y4F3 1742 aaKnown RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 PRSS44E7EML9 344 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 FCMRO60667 390 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 UBE2IP63279 158 aaKnown RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
SYNM-203ENST00000560674 THNSL2Q86YJ6 484 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 TSLPQ969D9 159 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
SYNM-203ENST00000560674 ANKRD61A6NGH8 418 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 E5RGE8 158 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 PDGFBP01127 241 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 CLEC3BP05452 202 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 SOX18P35713 384 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 OR8G1Q15617 311 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 STAC2Q6ZMT1 411 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 OR5AS1Q8N127 324 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 LINC01465Q8N7H1 131 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 FGF20Q9NP95 211 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 NSG2Q9Y328 171 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 A0A0B4J203 849 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 SSSCA1O60232 199 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 TBXA2RP21731 343 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 LGALS4P56470 323 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 PTOV1Q86YD1 416 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 TMEM123Q8N131 208 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 BPIFCQ8NFQ6 507 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 ATOH1Q92858 354 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 PLA2G12AQ9BZM1 189 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 SDCBPO00560 298 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 ZNF354AO60765 605 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 NKAIN1Q4KMZ8 207 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 OR2AK2Q8NG84 335 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 SPPL3Q8TCT6 385 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 OR2A14Q96R47 310 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 GINS3Q9BRX5 216 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 S1PR5Q9H228 398 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 GPR84Q9NQS5 396 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 POLDIP2Q9Y2S7 368 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 MRPS2Q9Y399 296 aaKnown RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 R4GMQ9 66 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 V9GYS6 101 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 CD3DP04234 171 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 GLI4P10075 376 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 EN2P19622 333 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 PPICP45877 212 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 RAB1AP62820 205 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 DMWDQ09019 674 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 HES1Q14469 280 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 SPANXN5Q5MJ07 72 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 NUDCD2Q8WVJ2 157 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 RNF150Q9ULK6 438 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 ZNF727A8MUV8 499 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 BSGP35613 385 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 EMP3P54852 163 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 PCK2Q16822 640 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 RPUSD3Q6P087 351 aaKnown RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
SYNM-203ENST00000560674 ZFP62Q8NB50 900 aaPredicted RBP11.51□□□□□ -0.57
SYNM-203ENST00000560674 RELL2Q8NC24 303 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms