RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TMEM160Q9NX00 188 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 NKIRAS2Q9NYR9 191 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TAS2R1Q9NYW7 299 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 KLHL21Q9UJP4 597 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 SAMHD1Q9Y3Z3 626 aaKnown RBP10.62□□□□□ -0.71
SMAD3-208ENST00000558827 WIPI2Q9Y4P8 454 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 N6AMT1Q9Y5N5 214 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 CDH10Q9Y6N8 788 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 STAB1Q9NY15 2570 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 CLDN25C9JDP6 229 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 F5H5K5 113 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 H0YL77 283 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 ARPC3O15145 178 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 KRT36O76013 467 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 GYPBP06028 91 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 SBK2P0C263 348 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 HNF1AP20823 631 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 GSTM3P21266 225 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 CALB2P22676 271 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 MRPS11P82912 194 aaKnown RBP10.61□□□□□ -0.71
SMAD3-208ENST00000558827 KCNMB1Q16558 191 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 RSPO1Q2MKA7 263 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-208ENST00000558827 LCN8Q6JVE9 175 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 FAHD2BQ6P2I3 314 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-208ENST00000558827 PHC2Q8IXK0 858 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 ATG16L2Q8NAA4 619 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 BHLHE23Q8NDY6 225 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 GJC3Q8NFK1 279 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 SLC26A10Q8NG04 563 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 OR4Q3Q8NH05 313 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 FAHD2AQ96GK7 314 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 LRGUKQ96M69 825 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 PITX2Q99697 317 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 EGLN1Q9GZT9 426 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF665Q9H7R5 613 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 TBC1D23Q9NUY8 699 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 ARMC1Q9NVT9 282 aa10.61□□□□□ -0.71
SMAD3-208ENST00000558827 MRPL22Q9NWU5 206 aaKnown RBP10.61□□□□□ -0.71
SMAD3-208ENST00000558827 B4DSR2 109 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 UBOX5O94941 541 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF205O95201 554 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 CLUP10909 449 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 PSKH1P11801 424 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 HMGA2P52926 109 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 CDK5R2Q13319 367 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 SPATS1Q496A3 300 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 FAM98BQ52LJ0 330 aaKnown RBP10.6□□□□□ -0.71
SMAD3-208ENST00000558827 OR2T5Q6IEZ7 315 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF770Q6IQ21 691 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-208ENST00000558827 SLC18B1Q6NT16 456 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 SPATC1Q76KD6 591 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 GLCCI1Q86VQ1 547 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 IQCF1Q8N6M8 205 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 SLC37A3Q8NCC5 494 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 PROKR2Q8NFJ6 384 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 OR10AD1Q8NGE0 317 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 OR2T29Q8NH02 315 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 RAB1CQ92928 201 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 PTP4A1Q93096 173 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 TMEM186Q96B77 213 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 OTULINQ96BN8 352 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 HAVCR1Q96D42 359 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 GAL3ST1Q99999 423 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 WACQ9BTA9 647 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 REEP1Q9H902 201 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 MED20Q9H944 212 aa10.6□□□□□ -0.71
SMAD3-208ENST00000558827 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 BHLHE40O14503 412 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 PLPP2O43688 288 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 IDH3BO43837 385 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 LCATP04180 440 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 MSMBP08118 114 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF823P16415 610 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 SELEP16581 610 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ANOS1P23352 680 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 GGT2P36268 569 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 MAGEA2P43356 314 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 DVL1P1P54792 670 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-208ENST00000558827 HIST1H3AP68431 136 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 COX10Q12887 443 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 CRMP1Q14194 572 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 MICAQ29983 383 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 SLC36A3Q495N2 470 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 FAM209AQ5JX71 171 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF362Q5T0B9 420 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-208ENST00000558827 HIST2H3PS2Q5TEC6 136 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 RASSF6Q6ZTQ3 369 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 HIST2H3AQ71DI3 136 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 TMEM179BQ7Z7N9 219 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ZBTB46Q86UZ6 589 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 OR10G2Q8NGC3 310 aa10.59□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF420Q8TAQ5 688 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-208ENST00000558827 BCAS4Q8TDM0 211 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms