RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RAET1LQ5VY80 246 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 FAM71CQ8NEG0 241 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 SORCS2Q96PQ0 1159 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 NICN1Q9BSH3 213 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 ZC4H2Q9NQZ6 224 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 SDHAF3Q9NRP4 125 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 TRBV5-5A0A0J9YX44 114 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 PRAF2O60831 178 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 SEC61A1P61619 476 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 DEFA5Q01523 94 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 ASPHD2Q6ICH7 369 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 LCN10Q6JVE6 187 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF704Q6ZNC4 412 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF546Q86UE3 836 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 NAA40Q86UY6 237 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 TDHQ8IZJ6 230 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 ADAT3Q96EY9 351 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 LRFN5Q96NI6 719 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 RBM24Q9BX46 236 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 GSKIPQ9P0R6 139 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 PIPOXQ9P0Z9 390 aa12.21□□□□□ -0.45
PRPF40B-209ENST00000548825 IGLV1-36A0A0B4J1U3 117 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF726A6NNF4 738 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 GLB1P16278 677 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 SLC9A3R2Q15599 337 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF626Q68DY1 528 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 TMEM81Q6P7N7 255 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 TMUB2Q71RG4 321 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 FJX1Q86VR8 437 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 PHF7Q9BWX1 381 aaPredicted RBP12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 POTEKPQ9BYX7 375 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 SLC5A6Q9Y289 635 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.46
PRPF40B-209ENST00000548825 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF432O94892 652 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 OR4E1P0C645 316 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF43P17038 809 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 CD34P28906 385 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 HRH1P35367 487 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 PNLIPRP2P54317 469 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 NKAPLQ5M9Q1 402 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 C12orf45Q8N5I9 185 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 ST8SIA4Q92187 359 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 PHYHIPQ92561 330 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 HOXB13Q92826 284 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 SEH1LQ96EE3 360 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 OR2S2Q9NQN1 319 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 RARRES3Q9UL19 164 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 ICE1Q9Y2F5 2266 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 MS4A18H0YCH9 400 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 EIF4E2O60573 245 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 TGM6O95932 706 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 PPP3CBP16298 524 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 S100A11P31949 105 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 NPY4RP50391 375 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 RAP2BP61225 183 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 CCL7P80098 99 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 AANATQ16613 207 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 MS4A18Q3C1V0 323 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 EMC4Q5J8M3 183 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 UEVLDQ8IX04 471 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 MR1Q95460 341 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 LIN37Q96GY3 246 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
PRPF40B-209ENST00000548825 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 CAPZA1P52907 286 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 GPR85P60893 370 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 IL13RA1P78552 427 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 C17orf67Q0P5P2 114 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF501Q96CX3 271 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 SERINC1Q9NRX5 453 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 IGKV3D-11A0A0A0MRZ8 115 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 MT-ATP6P00846 226 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 IGHV3-9P01782 118 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 CLDN17P56750 224 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ACTBP60709 375 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 DCAF7P61962 342 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ACTG1P63261 375 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 DNM1P34Q6PK57 102 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 GSG1LQ6UXU4 331 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 SLC43A2Q8N370 569 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ASB17Q8WXJ9 295 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 DDIT4LQ96D03 193 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF701Q9NV72 531 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 MRPS17Q9Y2R5 130 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF407Q9C0G0 2248 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 G3V3Q6 166 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 SULT2B1O00204 365 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 PHYHO14832 338 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 CTDSPLO15194 276 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms