RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PRKYO43930 277 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 JAK2O60674 1132 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 SNNO75324 88 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 SPAG7O75391 227 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 SCGNO76038 276 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 IQCF3P0C7M6 154 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PNMTP11086 282 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 MLNP12872 115 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 HOXB8P17481 243 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 FUT1P19526 365 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 EIF2S2P20042 333 aaKnown RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TCN1P20061 433 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 M6PRP20645 277 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 UQCRC2P22695 453 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ATP5C1P36542 298 aaKnown RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PTGFRP43088 359 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CASP4P49662 377 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RAB9AP51151 201 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PRKXP51817 358 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 NAPAP54920 295 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CDH4P55283 916 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 DAOAP59103 153 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RAP1BP61224 184 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 MAGOHP61326 146 aaKnown RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RAB11AP62491 216 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 FGL1Q08830 312 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TMED2Q15363 201 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RAB11BQ15907 218 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PTPN20Q4JDL3 420 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 AKIRIN2Q53H80 203 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 Q6ZPB1 254 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CCDC121Q6ZUS5 278 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 USP50Q70EL3 339 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 SLC51BQ86UW2 128 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TMEM17Q86X19 198 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CBWD2Q8IUF1 395 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RBM45Q8IUH3 476 aaKnown RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ARHGAP18Q8N392 663 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TBC1D19Q8N5T2 526 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 C19orf18Q8NEA5 215 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ZNF680Q8NEM1 530 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TTLQ8NG68 377 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 OR7G1Q8NGA0 311 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 OR8J2Q8NGG1 315 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 KCNG3Q8TAE7 436 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 UBA3Q8TBC4 463 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PLEKHA8Q96JA3 519 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 GLT1D1Q96MS3 346 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CCNL2Q96S94 520 aaPredicted RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RIT2Q99578 217 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CENPKQ9BS16 269 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 TMEM175Q9BSA9 504 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 MED10Q9BTT4 135 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ROGDIQ9GZN7 287 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 DERL2Q9GZP9 239 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 NAT10Q9H0A0 1025 aaKnown RBP2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 GAL3ST2Q9H3Q3 398 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ZNF385DQ9H6B1 395 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 ZNF160Q9HCG1 818 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CHRNA9Q9UGM1 479 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 OPN4Q9UHM6 478 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 RAB23Q9ULC3 237 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 FLVCR2Q9UPI3 526 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 OR10H1Q9Y4A9 318 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 COL6A3P12111 3177 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 SF3B1O75533 1304 aaKnown RBP eCLIP2.33□□□□□ -2.042e-6■■■■■ 43.4
UBE2D3-225ENST00000508476 CCDC171Q6TFL3 1326 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 PHLPP2Q6ZVD8 1323 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 COL24A1Q17RW2 1714 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 CDC42BPAQ5VT25 1732 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 NRAPQ86VF7 1730 aa2.33□□□□□ -2.04
UBE2D3-225ENST00000508476 LRP4O75096 1905 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 TOPAZ1Q8N9V7 1692 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 TNRC6CQ9HCJ0 1690 aaKnown RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 TRAV25A0A0B4J276 109 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 A0A1B0GUH1 482 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 SYCE1LA8MT33 242 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 H0YJX3 145 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 PGRMC1O00264 195 aaKnown RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 BCKDKO14874 412 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 LIN7AO14910 233 aaPredicted RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 ATP8B1O43520 1251 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 PSIP1O75475 530 aaKnown RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 SEMA3DO95025 777 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 CA1P00915 261 aaPredicted RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 IGLV3-19P01714 112 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 TNNC2P02585 160 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 CCL2P13500 99 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 TNNI1P19237 187 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 SRMP19623 302 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 PAICSP22234 425 aaKnown RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 CRABP2P29373 138 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 FDFT1P37268 417 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 LEPP41159 167 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 CDKN2CP42773 168 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 CDC34P49427 236 aaPredicted RBP2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 RGS4P49798 205 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 XIAPP98170 497 aa2.32□□□□□ -2.04
UBE2D3-225ENST00000508476 ENPEPQ07075 957 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms