RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 OR10G2Q8NGC3 310 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 OR51F2Q8NH61 342 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 SPTSSAQ969W0 71 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 APOBEC3DQ96AK3 386 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-232ENST00000489053 CMBLQ96DG6 245 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF582Q96NG8 517 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TSSK2Q96PF2 358 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 GPA33Q99795 319 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 COQ7Q99807 217 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 GAL3ST1Q99999 423 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 FUZQ9BT04 418 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TSSK6Q9BXA6 273 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 LPAR2Q9HBW0 351 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 MSL2Q9HCI7 577 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TREM2Q9NZC2 230 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 PTTG3PQ9NZH4 202 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 KIF17Q9P2E2 1029 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TMEFF2Q9UIK5 374 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-232ENST00000489053 KCNG2Q9UJ96 466 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 KLHL21Q9UJP4 597 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 B9D1Q9UPM9 204 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 RNF212BA8MTL3 300 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 F5H5K5 113 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 LILRA1O75019 489 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 SOX14O95416 240 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 GPANK1O95872 356 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 GASTP01350 101 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 LCATP04180 440 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 SCG5P05408 212 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 POU1F1P28069 291 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 FMO3P31513 532 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 MAGEA2P43356 314 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 RASSF2P50749 326 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 RAD23AP54725 363 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 TPTEP56180 551 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 TRAP1Q12931 704 aaKnown RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 KCNMB1Q16558 191 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 MICAQ29983 383 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CR1LQ2VPA4 569 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 SLC27A4Q6P1M0 643 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CORO6Q6QEF8 472 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 RASSF6Q6ZTQ3 369 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 IL17RELQ6ZVW7 336 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 PRIMA1Q86XR5 153 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 OR6V1Q8N148 313 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CYB561A3Q8NBI2 242 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 OR6K6Q8NGW6 343 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CLDND2Q8NHS1 167 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 ST7LQ8TDW4 575 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 GIPC3Q8TF64 312 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 SPRYD4Q8WW59 207 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 SLC7A6Q92536 515 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 GTF3AQ92664 365 aaKnown RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 PTP4A1Q93096 173 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 YIPF5Q969M3 257 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 PLEKHA8Q96JA3 519 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 ATF6BQ99941 703 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 COPS4Q9BT78 406 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 CHID1Q9BWS9 393 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 C1orf21Q9H246 121 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 FN3KQ9H479 309 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 UBAP1Q9NZ09 502 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 PURGQ9UJV8 347 aaKnown RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 STARD10Q9Y365 291 aa7.78□□□□□ -1.16
HDAC6-232ENST00000489053 ANK3Q12955 4377 aaKnown RBP7.78□□□□□ -1.16
HDAC6-232ENST00000489053 ARFGEF3Q5TH69 2177 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 IGLV1-36A0A0B4J1U3 117 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 TCRBV5S2A0A599 114 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 OR6C68A6NDL8 312 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 ZSCAN5BA6NJL1 495 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 AQP12BA6NM10 295 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 LRRC30A6NM36 301 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 KIAA1324LA8MWY0 1029 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 ICMTO60725 284 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 DBHP09172 617 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 SPARCP09486 303 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 GAAP10253 952 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 RAC2P15153 192 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 IGFBP5P24593 272 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 IL2RGP31785 369 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 PYCR1P32322 319 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 SRP9P49458 86 aaKnown RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 MMP15P51511 669 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 HMGA2P52926 109 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 BLVRAP53004 296 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 DVL1P1P54792 670 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 FXYD6P3P58550 94 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 COX10Q12887 443 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 PPP1R8Q12972 351 aaKnown RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 PSG7Q13046 419 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 CCDC92Q53HC0 331 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 ACSM5Q6NUN0 579 aa7.77□□□□□ -1.17
HDAC6-232ENST00000489053 FAHD2BQ6P2I3 314 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 MRPL21Q7Z2W9 205 aaKnown RBP7.77□□□□□ -1.17
HDAC6-232ENST00000489053 AQP12AQ8IXF9 295 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms