RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 HLA-HP01893 362 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 PATE4P0C8F1 98 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 PAX1P15863 534 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 PAX7P23759 505 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 CXCR4P61073 352 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 PIGFQ07326 219 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 AQP6Q13520 282 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 SLC36A2Q495M3 483 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 RBM48Q5RL73 367 aaKnown RBP11.34□□□□□ -0.59
NR1H3-223ENST00000486991 TMEM154Q6P9G4 183 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 CORO6Q6QEF8 472 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 TMEM108Q6UXF1 575 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 AHSA2Q719I0 299 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 DPY19L4Q7Z388 723 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 OR10H4Q8NGA5 316 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 OR52N5Q8NH56 324 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 FGFBP3Q8TAT2 258 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 NANOS1Q8WY41 292 aaKnown RBP11.34□□□□□ -0.59
NR1H3-223ENST00000486991 GGHQ92820 318 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 TBX5Q99593 518 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 LAMP3Q9UQV4 416 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
NR1H3-223ENST00000486991 TPRKBQ9Y3C4 175 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 LHFPL6Q9Y693 200 aa11.34□□□□□ -0.59
NR1H3-223ENST00000486991 CR1P17927 2039 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 IRGMA1A4Y4 181 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF670-ZNF695F2Z2N8 137 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 CRLF1O75462 422 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 UBL3O95164 117 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 FADS2O95864 444 aaKnown RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 CCDC159P0C7I6 412 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 PSKH1P11801 424 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF32P17041 273 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 PTAFRP25105 342 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 SLC15A1P46059 708 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 PCBD1P61457 104 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 RAB40BQ12829 278 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 EIF2B1Q14232 305 aaKnown RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 TEX30Q5JUR7 227 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 DCXRQ7Z4W1 244 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 WDR31Q8NA23 367 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 KBTBD8Q8NFY9 601 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 THEM6Q8WUY1 208 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 FBXO17Q96EF6 278 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 COPS4Q9BT78 406 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 TTTY10Q9BZA0 68 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 MRPS18AQ9NVS2 196 aaKnown RBP11.33□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 PSORS1C1Q9UIG5 152 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 LAMP5Q9UJQ1 280 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 AMDHD2Q9Y303 409 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 PCDHGB1Q9Y5G3 927 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 ABCA1O95477 2261 aa11.33□□□□□ -0.6
NR1H3-223ENST00000486991 ARPC4-TTLL3A0A0A6YYG9 625 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF503-AS2A6NEH8 195 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 NDUFS7O75251 213 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 RAB36O95755 333 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 WNT11O96014 354 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 SOD3P08294 240 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 OR2T7P0C7T2 308 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 DANCRP0C864 163 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 PIPP12273 146 aaPredicted RBP11.32□□□□□ -0.6
NR1H3-223ENST00000486991 CRHBPP24387 322 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 CDKN1AP38936 164 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 RAB1AP62820 205 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 SCRN3Q0VDG4 424 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 CLEC12BQ2HXU8 276 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 GSG1Q2KHT4 349 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
NR1H3-223ENST00000486991 SPATC1Q76KD6 591 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 DPPA2Q7Z7J5 298 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 MDP1Q86V88 176 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 OR2T27Q8NH04 317 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 OTOSQ8NHW6 89 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 TMEM80Q96HE8 168 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 BOD1Q96IK1 185 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 C1QTNF6Q9BXI9 259 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 C1orf198Q9H425 327 aa11.32□□□□□ -0.6
NR1H3-223ENST00000486991 NOX3Q9HBY0 568 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms