RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MAP6Q96JE9 813 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 COG8Q96MW5 612 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 IL4I1Q96RQ9 567 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 TEAD3Q99594 435 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 CACNG6Q9BXT2 260 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 MRPL37Q9BZE1 423 aaKnown RBP9.32□□□□□ -0.92
ATG4B-219ENST00000479941 OR51B6Q9H340 312 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 TOR3AQ9H497 397 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
ATG4B-219ENST00000479941 TUBG2Q9NRH3 451 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 GRIP1Q9Y3R0 1128 aa9.32□□□□□ -0.92
ATG4B-219ENST00000479941 E9PQ18 207 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 H7C417 338 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 DBHP09172 617 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ZNF250P15622 560 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 TESK1Q15569 626 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 MOGQ16653 247 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ZNF718Q3SXZ3 478 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ZNF454Q8N9F8 522 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 OTOSQ8NHW6 89 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ABHD4Q8TB40 342 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 FAM81AQ8TBF8 368 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 SYNPRQ8TBG9 265 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ST7LQ8TDW4 575 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 SLC7A6Q92536 515 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 SPTSSAQ969W0 71 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 SLAMF6Q96DU3 332 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 PERPQ96FX8 193 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 DOK1Q99704 481 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 DDX28Q9NUL7 540 aaKnown RBP9.31□□□□□ -0.92
ATG4B-219ENST00000479941 IMPAD1Q9NX62 359 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
ATG4B-219ENST00000479941 DUSP13Q9UII6 198 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 GMPPBQ9Y5P6 360 aa9.31□□□□□ -0.92
ATG4B-219ENST00000479941 ZNF469Q96JG9 3925 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 IGLV3-9A0A075B6K5 115 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 LOC100130705A0A1B0GUX0 176 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 TMEM129A0AVI4 362 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 CCDC182A6NF36 153 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 ZNF878C9JN71 531 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 F5H5K5 113 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 H0YHG0 523 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 H3BSA7 217 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 M0R129 80 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 CASQ2O14958 399 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLC16A6O15403 523 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SELENOFO60613 162 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 NGFP01138 241 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 LYNP07948 512 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 PSKH1P11801 424 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 GCH1P30793 250 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLC15A1P46059 708 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 PPOXP50336 477 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 NUDT6P53370 316 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 ATP5J2P56134 94 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 TPTEP56180 551 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 KLF3P57682 345 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 ERVS71-1P61550 626 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 PPP1CBP62140 327 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SNRPGP62308 76 aaKnown RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 TMED1Q13445 227 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 EIF2B1Q14232 305 aaKnown RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 GGTLC2Q14390 218 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 TAF13Q15543 124 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MSMPQ1L6U9 139 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 RSPO1Q2MKA7 263 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLC25A30Q5SVS4 291 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 OGFRL1Q5TC84 451 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MEDAGQ5VYS4 303 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SHEQ5VZ18 495 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MBNL2Q5VZF2 373 aaKnown RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 LPCAT4Q643R3 524 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 PRSS57Q6UWY2 283 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLC16A9Q7RTY1 509 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 BCDIN3DQ7Z5W3 292 aaKnown RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 GALNT4Q8N4A0 578 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 OR5L1Q8NGL2 311 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLC25A40Q8TBP6 338 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 RNF133Q8WVZ7 376 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 RFKQ969G6 155 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 APOBEC3DQ96AK3 386 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MARS2Q96GW9 593 aaKnown RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MBOAT4Q96T53 435 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SYT3Q9BQG1 590 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 ABHD6Q9BV23 337 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 C1QTNF5Q9BXJ0 243 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 OR2J1Q9GZK6 312 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 YIPF3Q9GZM5 350 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 MS4A5Q9H3V2 200 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 BARX1Q9HBU1 254 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-219ENST00000479941 CENPMQ9NSP4 180 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 SLCO1C1Q9NYB5 712 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 HAO2Q9NYQ3 351 aa9.3□□□□□ -0.92
ATG4B-219ENST00000479941 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms