RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 UBE2MP61081 183 aaKnown RBP5.62□□□□□ -1.51
LRCH3-215ENST00000476664 TLE4Q04727 773 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 SLAMF1Q13291 335 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ITGB3BPQ13352 177 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-215ENST00000476664 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 SH2D5Q6ZV89 423 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 RAB42Q8N4Z0 105 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF461Q8TAF7 563 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ACOT11Q8WXI4 607 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-215ENST00000476664 DNASE2BQ8WZ79 361 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 TM9SF4Q92544 642 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 HSFY1Q96LI6 401 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 OXGR1Q96P68 337 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 IL17FQ96PD4 163 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 TMEM59Q9BXS4 323 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ULBP2Q9BZM5 246 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ADNPQ9H2P0 1102 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 DEPPQ9NTK1 212 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 ICAM5Q9UMF0 924 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 SAMD4AQ9UPU9 718 aaKnown RBP5.62□□□□□ -1.51
LRCH3-215ENST00000476664 FADS3Q9Y5Q0 445 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 V9GYY9 64 aa5.62□□□□□ -1.51
LRCH3-215ENST00000476664 MN1Q10571 1320 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-215ENST00000476664 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 MXRA5Q9NR99 2828 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CUBNO60494 3623 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 IGKV6D-21A0A0A0MT36 114 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 B4DXG7 233 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 E7ENQ6 273 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SULT2B1O00204 365 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CDC7O00311 574 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 PCDH7O60245 1069 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 KLF8O95600 359 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CTRB1P17538 263 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 GABRG2P18507 467 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 IDSP22304 550 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 TFPI2P48307 235 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 EFNA3P52797 238 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 OR2B6P58173 313 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 RPS15AP62244 130 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 TWF1Q12792 350 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SRSF6Q13247 344 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 IL18R1Q13478 541 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CYLC2Q14093 348 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SERTAD2Q14140 314 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 TRAM2Q15035 370 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 FAM189A2Q15884 450 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SRSF7Q16629 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 MS4A13Q5J8X5 152 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 MUC21Q5SSG8 566 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF626Q68DY1 528 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CTRB2Q6GPI1 263 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 C1orf94Q6P1W5 598 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 RFWD3Q6PCD5 774 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 MBOAT1Q6ZNC8 495 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 NBEAL2Q6ZNJ1 2754 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 C9orf139Q6ZV77 190 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 TRPT1Q86TN4 253 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CCDC71Q8IV32 467 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF547Q8IVP9 402 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 EID2Q8N6I1 236 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 STPG4Q8N801 248 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 NECAP1Q8NC96 275 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 OR5K2Q8NHB8 316 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SLC7A13Q8TCU3 470 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 RAB3CQ96E17 227 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CHMP6Q96FZ7 201 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 NSD1Q96L73 2696 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 SORCS2Q96PQ0 1159 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 CYP2S1Q96SQ9 504 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 C7orf50Q9BRJ6 194 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 DOCK9Q9BZ29 2069 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 PATZ1Q9HBE1 687 aaKnown RBP5.61□□□□□ -1.51
LRCH3-215ENST00000476664 RETNQ9HD89 108 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 IL1RAPQ9NPH3 570 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 HMGXB4Q9UGU5 601 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 URGCP-MRPS24S4R325 110 aa5.61□□□□□ -1.51
LRCH3-215ENST00000476664 NFASCO94856 1347 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 STK36Q9NRP7 1315 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 TMEM213A2RRL7 107 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 MYMKA6NI61 221 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 VSTM2BA6NLU5 285 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 C15orf61A6NNL5 157 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 GFYI3L273 518 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 K7EQD1 137 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 CCL21O00585 134 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 EMC8O43402 210 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 COCHO43405 550 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 EEDO75530 441 aaKnown RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 CD55P08174 381 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 HOXD4P09016 255 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 PAX1P15863 534 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 TCN1P20061 433 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 UGT2B10P36537 528 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 SSR4P51571 173 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 EMP2P54851 167 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 RPS14P62263 151 aaKnown RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 MRPS21P82921 87 aaKnown RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 DPYSL3Q14195 570 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms