RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 OR6C6A6NF89 314 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 H3BSA7 217 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ZG16O60844 167 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 RAD51DO75771 328 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 CLPTM1O96005 669 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 IGLV1-44P01699 117 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 DBHP09172 617 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TACSTD2P09758 323 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 COX5BP10606 129 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ATP6V1B1P15313 513 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ZNF14P17017 642 aaPredicted RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 CRYGSP22914 178 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ANOS1P23352 680 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 PSMB10P40306 273 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 GP2P55259 537 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 NANOS3P60323 173 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 PCBD1P61457 104 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ACTC1P68032 377 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ACTA1P68133 377 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TUBA1BP68363 451 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 AQP6Q13520 282 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 GPR50Q13585 617 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 RAB39AQ14964 217 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TAB1Q15750 504 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SWI5Q1ZZU3 235 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SLC25A35Q3KQZ1 300 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SLC36A2Q495M3 483 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TP53I3Q53FA7 332 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TIMM23BQ5SRD1 257 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 C1QTNF12Q5T7M4 302 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ZNF774Q6NX45 483 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 MTFR2Q6P444 385 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 KCTD18Q6PI47 426 aaPredicted RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 SEZ6L2Q6UXD5 910 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 LRRN1Q6UXK5 716 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TMPRSS11AQ6ZMR5 421 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 TUBA1AQ71U36 451 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SPATC1Q76KD6 591 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 DPPA2Q7Z7J5 298 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 C17orf78Q8N4C9 275 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 IL17RDQ8NFM7 739 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 STEAP2Q8NFT2 490 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 OR10H5Q8NGA6 315 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 OR52N5Q8NH56 324 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 OR1F12Q8NHA8 337 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 RPS4Y2Q8TD47 263 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SNX33Q8WV41 574 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 HSD17B8Q92506 261 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SLC7A6Q92536 515 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SGK3Q96BR1 496 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 S100PBPQ96BU1 408 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 PELI1Q96FA3 418 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 POM121L2Q96KW2 1035 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 C4orf36Q96KX1 117 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 MGLLQ99685 303 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 KCNJ15Q99712 375 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ALG8Q9BVK2 526 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 OR10A4Q9H209 315 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 KCNN2Q9H2S1 579 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 RNF121Q9H920 327 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 KCNJ16Q9NPI9 418 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 DDX28Q9NUL7 540 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 GALNT8Q9NY28 637 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 COQ3Q9NZJ6 369 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 FRRS1LQ9P0K9 344 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 CRNNQ9UBG3 495 aaPredicted RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 ST6GALNAC2Q9UJ37 374 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 ERGIC3Q9Y282 383 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SF3B6Q9Y3B4 125 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 PHF3Q92576 2039 aaKnown RBP5.17□□□□□ -1.58
USP39-213ENST00000467885 ZFYVE26Q68DK2 2539 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 SPTA1P02549 2419 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CHD6Q8TD26 2715 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CLEC18AA5D8T8 446 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 DPRXA6NFQ7 191 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ACOD1A6NK06 481 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 OR4C45A6NMZ5 311 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 EEF1E1-BLOC1S5C9J1V9 151 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PYCARD-AS1I3L0S3 204 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PHYHO14832 338 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 EEF1E1O43324 174 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 SGCEO43556 437 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PLPP2O43688 288 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 FARS2O95363 451 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MT-ND5P03915 603 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CD1AP06126 327 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 H2BFMP0C1H6 154 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ACSM4P0C7M7 580 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 RNF224P0DH78 156 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CD79AP11912 226 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CCL2P13500 99 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ZNF35P13682 527 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MYL12AP19105 171 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PAX7P23759 505 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 APEX1P27695 318 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 GRNP28799 593 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 LIPAP38571 399 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms