RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 GTPBP8Q8N3Z3 284 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 ZDHHC22Q8N966 263 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 OR13C3Q8NGS6 347 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 STOML3Q8TAV4 291 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 GPBAR1Q8TDU6 330 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 RELTQ969Z4 430 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PHB2Q99623 299 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 TLNRD1Q9H1K6 362 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF629Q9UEG4 869 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 LOC101059948A0A1B0GTJ6 334 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 C17orf105B2RV13 164 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 EFSO43281 561 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF208O43345 1280 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 STK17BO94768 372 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ERCC1P07992 297 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 Q6ZSR6 202 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 RAB11FIP2Q7L804 512 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 RTN4RL2Q86UN3 420 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 OR4A4PQ8NGN8 299 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ADOQ96SZ5 270 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 SELENOIQ9C0D9 397 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 G6PC2Q9NQR9 355 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 TMEM100Q9NV29 134 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 DZANK1Q9NVP4 752 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 VSX1Q9NZR4 365 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 HHLA2Q9UM44 414 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 PCNX3Q9H6A9 2034 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 TRAV36DV7A0A075B6V5 113 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 MEGF11A6BM72 1044 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ICOSLGO75144 302 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 CRHP06850 196 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 VAMP1P23763 118 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 CXCR1P25024 350 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 PNLIPRP2P54317 469 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 SLC37A1P57057 533 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 MICBQ29980 383 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF528Q3MIS6 628 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 TMPPEQ6ZT21 453 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 OR52N5Q8NH56 324 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 PTX4Q96A99 478 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 FOXRED1Q96CU9 486 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 LAT2Q9GZY6 243 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 COA4Q9NYJ1 87 aa11.63□□□□□ -0.55
PDZRN3-205ENST00000466780 HCRTR2O43614 444 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 NUDT21O43809 227 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 AKR1C4P17516 323 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 PVALBP20472 110 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 HRH1P35367 487 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 RAB13P51153 203 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 BIKQ13323 160 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 UNC119Q13432 240 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 SGCBQ16585 318 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 SLC22A18ASQ8N1D0 253 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 PTPMT1Q8WUK0 201 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 RRNAD1Q96FB5 475 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 C12orf57Q99622 126 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 SLC7A5P2Q9GIP4 190 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 CNTD2Q9H8S5 307 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 CSAG2Q9Y5P2 127 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 R4GMQ9 66 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 CPAMD8Q8IZJ3 1885 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 TEX13DA0A0J9YY54 714 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 DBX1A6NMT0 343 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 F8W036 122 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 NSA2O95478 260 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 RAB6AP20340 208 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 PSMB6P28072 239 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 NPBWR1P48145 328 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 MAMDC2Q7Z304 686 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 OR13H1Q8NG92 308 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 MMABQ96EY8 250 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 CHMP1AQ9HD42 196 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-205ENST00000466780 GON4LQ3T8J9 2241 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 TRBV6-7A0A0A0MS04 114 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 C13orf42A0A1B0GVH6 325 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 DUS4LO95620 317 aaKnown RBP11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 SERPINF1P36955 418 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 CBX5P45973 191 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 HSD17B7P56937 341 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 ARMC6Q6NXE6 501 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 H3F3CQ6NXT2 135 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 FAHD2BQ6P2I3 314 aaPredicted RBP11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 ELP5Q8TE02 316 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 TMED6Q8WW62 240 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 DCUN1D4Q92564 292 aa11.61□□□□□ -0.55
PDZRN3-205ENST00000466780 FAHD2AQ96GK7 314 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms