RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SPATA46Q5T0L3 261 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 SHQ1Q6PI26 577 aaKnown RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 CORO6Q6QEF8 472 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 RFPL4BQ6ZWI9 263 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 ZNF786Q8N393 782 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 KLF14Q8TD94 323 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 MARS2Q96GW9 593 aaKnown RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 OR2J1Q9GZK6 312 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 CMC2Q9NRP2 79 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 CGGBP1Q9UFW8 167 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-213ENST00000460211 AP4S1Q9Y587 144 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 LHFPL6Q9Y693 200 aa12.79□□□□□ -0.36
ATG4B-213ENST00000460211 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
ATG4B-213ENST00000460211 NGFP01138 241 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 PRKACGP22612 351 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 NR4A2P43354 598 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 HIST1H3AP68431 136 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 GINS1Q14691 196 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 ZMAT1Q5H9K5 638 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 SLC18B1Q6NT16 456 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 HIST2H3AQ71DI3 136 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 HIPK1Q86Z02 1210 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 OR9Q1Q8NGQ5 310 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 OR5K1Q8NHB7 308 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 RDH5Q92781 318 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 OTULINQ96BN8 352 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 RBM4Q9BWF3 364 aaKnown RBP12.78□□□□□ -0.36
ATG4B-213ENST00000460211 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 NKIRAS2Q9NYR9 191 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 CYB5R1Q9UHQ9 305 aa12.78□□□□□ -0.36
ATG4B-213ENST00000460211 TIMM8AO60220 97 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 SPI1P17947 270 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 ZNF81P51508 661 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 MRPS11P82912 194 aaKnown RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 GGTLC2Q14390 218 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 ATP6AP1Q15904 470 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 ASRGL1Q7L266 308 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 OR6K6Q8NGW6 343 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 SLC7A6Q92536 515 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 UTP4Q969X6 686 aaKnown RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 DUS3LQ96G46 650 aaKnown RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 ATF6BQ99941 703 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 NTN4Q9HB63 628 aa12.77□□□□□ -0.37
ATG4B-213ENST00000460211 PAPOLBQ9NRJ5 636 aaKnown RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 MRPL22Q9NWU5 206 aaKnown RBP12.77□□□□□ -0.37
ATG4B-213ENST00000460211 CR1P17927 2039 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 TVP23AA6NH52 213 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 G3V2T6 193 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 DBHP09172 617 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 GIFP27352 417 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 GGT2P36268 569 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 MPV17P39210 176 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 ENTPD1P49961 510 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 TPTEP56180 551 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 FAM209AQ5JX71 171 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 PTP4A1Q93096 173 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 DIRC2Q96SL1 478 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 EGLN1Q9GZT9 426 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 ZDHHC8Q9ULC8 765 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
ATG4B-213ENST00000460211 PRR23D1E9PI22 279 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-213ENST00000460211 F5H5K5 113 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 ZNF593O00488 134 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-213ENST00000460211 SPRY3O43610 288 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-213ENST00000460211 CD5LO43866 347 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 ABCA1O95477 2261 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 HPXP02790 462 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 GYPBP06028 91 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 SPARCP09486 303 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 PRR23D2P0DMB1 279 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-213ENST00000460211 ZNF23P17027 643 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 ACHEP22303 614 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 GZMKP49863 264 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 TMEM33P57088 247 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 CCL8P80075 99 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 CDK5Q00535 292 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 DBPQ10586 325 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-213ENST00000460211 PSG7Q13046 419 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 CCNIQ14094 377 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 TAF13Q15543 124 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 TMEM249Q2WGJ8 235 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 TEX30Q5JUR7 227 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
ATG4B-213ENST00000460211 CFAP77Q6ZQR2 320 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms