RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ZDHHC22Q8N966 263 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 OR13C9Q8NGT0 318 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 SLC41A2Q96JW4 573 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 C19orf12Q9NSK7 152 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 IL17BQ9UHF5 180 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 MTCL1Q9Y4B5 1905 aaKnown RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 A0A1W2PR48 441 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 NGFRP08138 427 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 MAP3K8P41279 467 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ARRB1P49407 418 aaPredicted RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 JOSD1Q15040 202 aaPredicted RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 SLC9A3R2Q15599 337 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ISXQ2M1V0 245 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 MRPL2Q5T653 305 aaKnown RBP16.78■□□□□ 0.28
PTPA-223ENST00000452489 JAGN1Q8N5M9 183 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 OR10C1Q96KK4 312 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 MRGPRX3Q96LB0 322 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
PTPA-223ENST00000452489 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 CD70P32970 193 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 PMPCAQ10713 525 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 COTL1Q14019 142 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 FAM220AQ7Z4H9 259 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 MTHFD2LQ9H903 347 aaPredicted RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 GOLGA4Q13439 2230 aaKnown RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 ARID1AO14497 2285 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 ZNF705GA8MUZ8 300 aaPredicted RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 SLC17A2O00624 439 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 CST4P01036 141 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 SNRPD1P62314 119 aaKnown RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 LMAN2Q12907 356 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 THEM4Q5T1C6 240 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 THNSL2Q86YJ6 484 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 MARCH1Q8TCQ1 289 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 AIF1LQ9BQI0 150 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 KLF16Q9BXK1 252 aaPredicted RBP16.77■□□□□ 0.28
PTPA-223ENST00000452489 LAMP5Q9UJQ1 280 aa16.77■□□□□ 0.28
PTPA-223ENST00000452489 OR4C45A6NMZ5 311 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 C4orf51C9J302 202 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 C1QL1O75973 258 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 LAMP2P13473 410 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 TDGF1P3P51864 188 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 SMAD4Q13485 552 aaKnown RBP16.76■□□□□ 0.27
PTPA-223ENST00000452489 LEG1Q6P5S2 330 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 NPEPL1Q8NDH3 523 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 SLC22A18Q96BI1 424 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 NELFAQ9H3P2 528 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 PEX12O00623 359 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 DOK2O60496 412 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 S1PR1P21453 382 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 VASPP50552 380 aaPredicted RBP16.76■□□□□ 0.27
PTPA-223ENST00000452489 SMAD3P84022 425 aaKnown RBP16.76■□□□□ 0.27
PTPA-223ENST00000452489 FAM46CQ5VWP2 391 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 OR5AR1Q8NGP9 310 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 RNF128Q8TEB7 428 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 GLYATL1Q969I3 302 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 RASD2Q96D21 266 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 TSSK2Q96PF2 358 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 CNTNAP3Q9BZ76 1288 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 CBLN4Q9NTU7 201 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 GSKIPQ9P0R6 139 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 FBXL17Q9UF56 701 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 IKZF2Q9UKS7 526 aa16.76■□□□□ 0.27
PTPA-223ENST00000452489 HEATR5BQ9P2D3 2071 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 RAB27BO00194 218 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 CD37P11049 281 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 CHATP28329 748 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 HRH1P35367 487 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 THBS4P35443 961 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 FAHD2BQ6P2I3 314 aaPredicted RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 TRAM1L1Q8N609 369 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 NPRL2Q8WTW4 380 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 TSEN15Q8WW01 171 aaKnown RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 HPSE2Q8WWQ2 592 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 MCHR2Q969V1 340 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 FAHD2AQ96GK7 314 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 SNX22Q96L94 193 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 RXFP3Q9NSD7 469 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 ABT1Q9ULW3 272 aaKnown RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 CXCL11O14625 94 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 AIFM1O95831 613 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 THEGLP0DJG4 465 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 CCKBRP32239 447 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 RPS27P42677 84 aaKnown RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 MRPS11P82912 194 aaKnown RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 ZNF658BQ4V348 819 aaPredicted RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 SOHLH1Q5JUK2 328 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 ASPHD2Q6ICH7 369 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 MED25Q71SY5 747 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 DOK4Q8TEW6 326 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 C2orf15Q8WU43 125 aaKnown RBP16.75■□□□□ 0.27
PTPA-223ENST00000452489 NKD1Q969G9 470 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 RAB39BQ96DA2 213 aa16.75■□□□□ 0.27
PTPA-223ENST00000452489 DTD2Q96FN9 168 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms