RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 OR2V2Q96R30 315 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 ELAC2Q9BQ52 826 aaKnown RBP17.74■□□□□ 0.43
VSX1-206ENST00000444511 PATZ1Q9HBE1 687 aaKnown RBP17.74■□□□□ 0.43
VSX1-206ENST00000444511 PTTG3PQ9NZH4 202 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 PPP1R3DO95685 299 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 RBMXP38159 391 aaKnown RBP17.73■□□□□ 0.43
VSX1-206ENST00000444511 BTG1P62324 171 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 ZMYND11Q15326 602 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 LRRC28Q86X40 367 aaPredicted RBP17.73■□□□□ 0.43
VSX1-206ENST00000444511 GJC3Q8NFK1 279 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 FANK1Q8TC84 345 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 DHRS1Q96LJ7 313 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 TSSK2Q96PF2 358 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 ERMAPQ96PL5 475 aaPredicted RBP17.73■□□□□ 0.43
VSX1-206ENST00000444511 HDHD2Q9H0R4 259 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 MYLK2Q9H1R3 596 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 V9GYQ6 96 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 TANC2Q9HCD6 1990 aa17.73■□□□□ 0.43
VSX1-206ENST00000444511 GPANK1O95872 356 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 FSHBP01225 129 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 PRDX6P30041 224 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 SMIM11AP58511 58 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 HLXQ14774 488 aaPredicted RBP17.72■□□□□ 0.43
VSX1-206ENST00000444511 MEP1BQ16820 701 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 SLC27A4Q6P1M0 643 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 FBXW12Q6X9E4 464 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 JAZF1Q86VZ6 243 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 C22orf15Q8WYQ4 148 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 APOBEC3DQ96AK3 386 aaPredicted RBP17.72■□□□□ 0.43
VSX1-206ENST00000444511 GPA33Q99795 319 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 COQ7Q99807 217 aa17.72■□□□□ 0.43
VSX1-206ENST00000444511 TMEM89A2RUT3 159 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 DCTN6O00399 190 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 GADD45GO95257 159 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 SLC6A6P31641 620 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 SLC6A9P48067 706 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 COMPP49747 757 aaPredicted RBP17.71■□□□□ 0.43
VSX1-206ENST00000444511 SPIBQ01892 262 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 ARMCX4Q5H9R4 360 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 OR2T2Q6IF00 324 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 LEG1Q6P5S2 330 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 C3orf56Q8N813 242 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 DEFB108BQ8NET1 73 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 OR8G5Q8NG78 346 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 OR10AD1Q8NGE0 317 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 OR13G1Q8NGZ3 307 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 PYURFQ96I23 114 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 ZNF582Q96NG8 517 aaPredicted RBP17.71■□□□□ 0.43
VSX1-206ENST00000444511 SIGLEC11Q96RL6 698 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 FUZQ9BT04 418 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 GORASP2Q9H8Y8 452 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
VSX1-206ENST00000444511 GCM1Q9NP62 436 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 MMP26Q9NRE1 261 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 LHFPL6Q9Y693 200 aa17.71■□□□□ 0.43
VSX1-206ENST00000444511 IGLV1-36A0A0B4J1U3 117 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 TMEM178BH3BS89 294 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 IFNL4K9M1U5 179 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 RENP00797 406 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 MDH2P40926 338 aaKnown RBP17.7■□□□□ 0.42
VSX1-206ENST00000444511 MMP16P51512 607 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 SEC61A1P61619 476 aaKnown RBP17.7■□□□□ 0.42
VSX1-206ENST00000444511 HIST1H3AP68431 136 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 RFX4Q33E94 735 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 ESCO2Q56NI9 601 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 HIST2H3PS2Q5TEC6 136 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 CORO6Q6QEF8 472 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 HIST2H3AQ71DI3 136 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 MUC20Q8N307 709 aaPredicted RBP17.7■□□□□ 0.42
VSX1-206ENST00000444511 POP5Q969H6 163 aaKnown RBP17.7■□□□□ 0.42
VSX1-206ENST00000444511 NMNAT3Q96T66 252 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 FAM107BQ9H098 131 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 OR52D1Q9H346 318 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 NTN4Q9HB63 628 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 B9D1Q9UPM9 204 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 POLR3KQ9Y2Y1 108 aaPredicted RBP17.7■□□□□ 0.42
VSX1-206ENST00000444511 AUP1Q9Y679 476 aa17.7■□□□□ 0.42
VSX1-206ENST00000444511 TRAPPC2LH3BP13 241 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 NOS3P29474 1203 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 SRP9P49458 86 aaKnown RBP17.69■□□□□ 0.42
VSX1-206ENST00000444511 COX10Q12887 443 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 ZNF154Q13106 437 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 RBMS3Q6XE24 437 aaKnown RBP17.69■□□□□ 0.42
VSX1-206ENST00000444511 OR6V1Q8N148 313 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 MCUR1Q96AQ8 359 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 MEGF10Q96KG7 1140 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 MRI1Q9BV20 369 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 IFT27Q9BW83 186 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 ESM1Q9NQ30 184 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 DDX28Q9NUL7 540 aaKnown RBP17.69■□□□□ 0.42
VSX1-206ENST00000444511 OR5V1Q9UGF6 321 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 MAGEL2Q9UJ55 1249 aa17.69■□□□□ 0.42
VSX1-206ENST00000444511 A8MXK9 166 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 F5H0A9 414 aaPredicted RBP17.68■□□□□ 0.42
VSX1-206ENST00000444511 ARPC3O15145 178 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 OR10H3O60404 316 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 HIST1H1CP16403 213 aaKnown RBP17.68■□□□□ 0.42
VSX1-206ENST00000444511 ZNF12P17014 697 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 FPR3P25089 353 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 SLC36A3Q495N2 470 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms