RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MED29Q9NX70 200 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 MLLT11Q13015 90 aaPredicted RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 DUSP5Q16690 384 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 CBARPQ8N350 705 aaPredicted RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 SLC16A11Q8NCK7 471 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 PXT1Q8NFP0 134 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 PCDHGA9Q9Y5G4 932 aaKnown RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 TAPBPO15533 448 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 FABP1P07148 127 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 EIF1P41567 113 aaKnown RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 DBPQ10586 325 aaPredicted RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 BTNL8Q6UX41 500 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 DPY19L2P2Q6ZN68 376 aa14.89□□□□□ -0.03
RGP1-201ENST00000378078 SDR39U1Q9NRG7 319 aaPredicted RBP14.89□□□□□ -0.03
RGP1-201ENST00000378078 TMEM267Q0VDI3 215 aaPredicted RBP14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR1J1Q8NGS3 322 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ADAMTS14Q8WXS8 1223 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ZNF320A2RRD8 509 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 NRASP01111 189 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 REEP5Q00765 189 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ERGIC1Q969X5 290 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 RTP4Q96DX8 246 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
RGP1-201ENST00000378078 LRP10Q7Z4F1 713 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR2AE1Q8NHA4 323 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 POLR2IP36954 125 aaKnown RBP14.88□□□□□ -0.03
RGP1-201ENST00000378078 DHRS13Q6UX07 377 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 TMPRSS13Q9BYE2 586 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 UBE2L5PA0A1B0GUS4 154 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 H3BMH7 237 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 GPR171O14626 319 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR2T7P0C7T2 308 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ARHGEF39Q8N4T4 335 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR6S1Q8NH40 331 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 NRG4Q8WWG1 115 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 COMMD5Q9GZQ3 224 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 SLCO5A1Q9H2Y9 848 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR6C68A6NDL8 312 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 OR2C1O95371 312 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 HBE1P02100 147 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 MPGP29372 298 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 DLX5P56178 289 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 RPS23P62266 143 aaKnown RBP14.88□□□□□ -0.03
RGP1-201ENST00000378078 VEZF1Q14119 521 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 HDAC8Q9BY41 377 aa14.88□□□□□ -0.03
RGP1-201ENST00000378078 ADGRE4PQ86SQ3 457 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 OR2I1PQ8NGU4 316 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 MARCH5Q9NX47 278 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 C19orf57Q0VDD7 668 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 TOR2AQ5JU69 321 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 CELF2-AS1Q8N7Q2 184 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 RGPD5Q99666 1765 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 OR3A4PP47883 348 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 TFAP2EQ6VUC0 442 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 SPPL3Q8TCT6 385 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 SLAMF6Q96DU3 332 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 CLDN24A6NM45 220 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 IDSB3KWA1 339 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 ELK1P19419 428 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 SOHLH1Q5JUK2 328 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 LGI3Q8N145 548 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 ZBP1Q9H171 429 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 PDLIM7Q9NR12 457 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 INPP5EQ9NRR6 644 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 MOKQ9UQ07 419 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 YKT6O15498 198 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 CNR1P21554 472 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 RBP2P50120 134 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 CSNK1G2P78368 415 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 NKAIN4Q8IVV8 208 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 C17orf78Q8N4C9 275 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 RAB22AQ9UL26 194 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 CDK5RAP2Q96SN8 1893 aa14.87□□□□□ -0.03
RGP1-201ENST00000378078 IGHV3-43A0A0B4J1X8 118 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 LOC102723971A0A1B0GUV8 181 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 SOD1P00441 154 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 IGHV3-43DP0DP04 118 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 BMP2P12643 396 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 ARR3P36575 388 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 CSNK1DP48730 415 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 RPL27P61353 136 aaKnown RBP14.86□□□□□ -0.03
RGP1-201ENST00000378078 FRMPD2BQ6IN97 320 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 CD300LGQ6UXG3 332 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 ZNF788Q6ZQV5 615 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 EAF1Q96JC9 268 aaPredicted RBP14.86□□□□□ -0.03
RGP1-201ENST00000378078 CSF3RQ99062 836 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 RNF167Q9H6Y7 350 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 CHST2Q9Y4C5 530 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 GPANK1O95872 356 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 MMP7P09237 267 aaPredicted RBP14.86□□□□□ -0.03
RGP1-201ENST00000378078 DUSP1P28562 367 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 MEOX1P50221 254 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 GFERP55789 205 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 THSD4Q6ZMP0 1018 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 FABP7O15540 132 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 XRCC2O43543 280 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 PAPLNO95428 1278 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 NKX2-1P43699 371 aaPredicted RBP14.86□□□□□ -0.03
RGP1-201ENST00000378078 KRTDAPP60985 99 aa14.86□□□□□ -0.03
RGP1-201ENST00000378078 PXDC1Q5TGL8 231 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms