RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 OR2T2Q6IF00 324 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 SLC27A4Q6P1M0 643 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 TBPL2Q6SJ96 375 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 RNF113BQ8IZP6 322 aaKnown RBP11.52□□□□□ -0.57
CXCL12-202ENST00000374426 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 OR2T12Q8NG77 320 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 OR8G5Q8NG78 346 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 OR1F12Q8NHA8 337 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 ACOT11Q8WXI4 607 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-202ENST00000374426 TMEM246Q9BRR3 403 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 FNDC11Q9BVV2 318 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 PTTG3PQ9NZH4 202 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 MIOXQ9UGB7 285 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 MMP24Q9Y5R2 645 aa11.52□□□□□ -0.57
CXCL12-202ENST00000374426 KIR2DS1A0A191URI9 304 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 BBIP1A8MTZ0 92 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 IMPA2O14732 288 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 RER1O15258 196 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 MLNRO43193 412 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 SLC16A7O60669 478 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 FSTL3O95633 263 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 IFNW1P05000 195 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 RGS6P49758 472 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
CXCL12-202ENST00000374426 SRSF4Q08170 494 aaKnown RBP11.51□□□□□ -0.57
CXCL12-202ENST00000374426 KLF10Q13118 480 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF181Q2M3W8 571 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF404Q494X3 552 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ZBED5Q49AG3 693 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 FAM201AQ5SY85 155 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 TMPRSS11FQ6ZWK6 438 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 MBOAT2Q6ZWT7 520 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 GLB1L2Q8IW92 636 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 OR10S1Q8NGN2 331 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 OR13G1Q8NGZ3 307 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 RASD2Q96D21 266 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 NEIL1Q96FI4 390 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-202ENST00000374426 PLEKHA8Q96JA3 519 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF570Q96NI8 536 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 SLC30A2Q9BRI3 323 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 GMPR2Q9P2T1 348 aaKnown RBP11.51□□□□□ -0.57
CXCL12-202ENST00000374426 ATPIF1Q9UII2 106 aa11.51□□□□□ -0.57
CXCL12-202ENST00000374426 COA3Q9Y2R0 106 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-202ENST00000374426 A0A1B0GWJ7 208 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 ELOVL7A1L3X0 281 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 FAM181BA6NEQ2 426 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 F5H5P2 479 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 SELEP16581 610 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 PMELP40967 661 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 PITPNBP48739 271 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 SRP9P49458 86 aaKnown RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 KRR1Q13601 381 aaKnown RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 OCLNQ16625 522 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 BHLHE23Q8NDY6 225 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 OR8B3Q8NGG8 313 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 OR5L1Q8NGL2 311 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 LZICQ8WZA0 190 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF582Q96NG8 517 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 OR8B2Q96RD0 313 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 RERGLQ9H628 205 aa11.5□□□□□ -0.57
CXCL12-202ENST00000374426 NMNAT1Q9HAN9 279 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 VSX1Q9NZR4 365 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 PDP1Q9P0J1 537 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-202ENST00000374426 LOC100653049A0A140TA62 436 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 HMGB1P1B2RPK0 211 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-202ENST00000374426 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 KHDRBS3O75525 346 aaKnown RBP11.49□□□□□ -0.57
CXCL12-202ENST00000374426 KRT34O76011 436 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 SDHAP31040 664 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 FGF12P61328 243 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 HIST1H3AP68431 136 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 RELBQ01201 579 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 HIST2H3PS2Q5TEC6 136 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 HIST2H3AQ71DI3 136 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 NLRC3Q7RTR2 1065 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 NUAK2Q9H093 628 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 WDR76Q9H967 626 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 SAR1AQ9NR31 198 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 CMTM6Q9NX76 183 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 SIGLEC7Q9Y286 467 aa11.49□□□□□ -0.57
CXCL12-202ENST00000374426 A0A1B0GUS0 222 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms