RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CAMK2BQ13554 666 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 TRA2AQ13595 282 aaKnown RBP eCLIP15.1■□□□□ 0.015e-8■□□□□ 10.4
PHRF1-201ENST00000264555 IL11RAQ14626 422 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 FBXW12Q6X9E4 464 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 CES1P1Q9UKY3 287 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 IGHV3-9P01782 118 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.1■□□□□ 0.01
PHRF1-201ENST00000264555 SMRP1Q8NCR6 262 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 OR6C65A6NJZ3 312 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 RNF212BA8MTL3 300 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 FADS1O60427 444 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 RAD52P43351 418 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 SSBP1Q04837 148 aaKnown RBP15.1■□□□□ 0.01
PHRF1-201ENST00000264555 NOXO1Q8NFA2 376 aa15.1■□□□□ 0.01
PHRF1-201ENST00000264555 A0A1B0GUH1 482 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 LALBAP00709 142 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 GUSBP08236 651 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 GALNSP34059 522 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 DSCR4P56555 118 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 ANKRD37Q7Z713 158 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 SECTM1Q8WVN6 248 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 LUZP4Q9P127 313 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 A0A0B4J2A0 478 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 SLC17A2O00624 439 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 CXCL13O43927 109 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 GCDHQ92947 438 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 NKX3-1Q99801 234 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 NEURL2Q9BR09 285 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 HAO2Q9NYQ3 351 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 SHPKQ9UHJ6 478 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 PTPRFP10586 1907 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 DHHO43323 396 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 ATF1P18846 271 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 SHBQ15464 509 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 COQ3Q9NZJ6 369 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 KLF13Q9Y2Y9 288 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 LRP12Q9Y561 859 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 CCL11P51671 97 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 RPP30P78346 268 aaKnown RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 LSMEM1Q8N8F7 131 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 KCNJ16Q9NPI9 418 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 ANKRD33BA6NCL7 494 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 SNRPGP15A8MWD9 76 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 HSPB6O14558 160 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 PRICKLE3O43900 615 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 MSMO1Q15800 293 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 IAH1Q2TAA2 248 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-201ENST00000264555 C11orf40Q8WZ69 217 aa15.09■□□□□ 0.01
PHRF1-201ENST00000264555 BHLHE40O14503 412 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TOX3O15405 576 aaPredicted RBP15.08■□□□□ 0.01
PHRF1-201ENST00000264555 C1QCP02747 245 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TUBG1P23258 451 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 INSL4Q14641 139 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 PEA15Q15121 130 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 PCK2Q16822 640 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TBC1D28Q2M2D7 210 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 OGFOD3Q6PK18 319 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TMUB2Q71RG4 321 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TSPAN32Q96QS1 320 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 HRH4Q9H3N8 390 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 UCK1Q9HA47 277 aa15.08■□□□□ 0.01
PHRF1-201ENST00000264555 TIMM8AO60220 97 aaPredicted RBP15.08■□□□□ 0
PHRF1-201ENST00000264555 CD3DP04234 171 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 CDKN2AP42771 156 aaKnown RBP15.08■□□□□ 0
PHRF1-201ENST00000264555 MYBPHQ13203 477 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 IRF3Q14653 427 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 ESCO2Q56NI9 601 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 CBLN3Q6UW01 205 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 OR10K1Q8NGX5 313 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 NMNAT2Q9BZQ4 307 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 C12orf49Q9H741 205 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 MYOTQ9UBF9 498 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 GPR160Q9UJ42 338 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 KRBOX1C9JBD0 128 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 ZFPL1O95159 310 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 MVDP53602 400 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 PLXDC2Q6UX71 529 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 GLCCI1Q86VQ1 547 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 FLRT3Q9NZU0 649 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 FBXL4Q9UKA2 621 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 FLVCR2Q9UPI3 526 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 TNFSF11O14788 317 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 FBXO24O75426 580 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 MED6O75586 246 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 TBPP20226 339 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 FAAP20Q6NZ36 180 aa15.08■□□□□ 0
PHRF1-201ENST00000264555 H7C1Q1 480 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 EPHA8P29322 1005 aaPredicted RBP15.07■□□□□ 0
PHRF1-201ENST00000264555 EMP3P54852 163 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 CDONQ4KMG0 1287 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 AADACL3Q5VUY0 350 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 B3GAT1Q9P2W7 334 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 KLK11Q9UBX7 282 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 DCTDP32321 178 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 GZMKP49863 264 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 ZNF136P52737 540 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 RAB31Q13636 194 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 EBPQ15125 230 aaKnown RBP15.07■□□□□ 0
PHRF1-201ENST00000264555 OR5B12Q96R08 314 aa15.07■□□□□ 0
PHRF1-201ENST00000264555 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.07■□□□□ 05e-9■■■□□ 18.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms