RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 RFC3P40938 356 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 NUTF2P61970 127 aaKnown RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 OR7A5Q15622 319 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 NSDHLQ15738 373 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 ZNF726P1Q15940 193 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 GABRA6Q16445 453 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 LCN12Q6JVE5 192 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 RALGPS2Q86X27 583 aaPredicted RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 ZNF584Q8IVC4 421 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 ARHGAP18Q8N392 663 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 TCAIMQ8N3R3 496 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 FAM86B1Q8N7N1 296 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 NDNFQ8TB73 568 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 LRRC20Q8TCA0 184 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 MRAPQ8TCY5 172 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 TCP10LQ8TDR4 215 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 RPF2Q9H7B2 306 aaKnown RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 EML4Q9HC35 981 aaKnown RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 KCNJ16Q9NPI9 418 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 ZNF282Q9UDV7 671 aaPredicted RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 NAP1L2Q9ULW6 460 aaPredicted RBP3.96□□□□□ -1.78
LINC00458-206ENST00000607494 SHANK2Q9UPX8 1470 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 PLXNC1O60486 1568 aa3.96□□□□□ -1.78
LINC00458-206ENST00000607494 CDC42BPAQ5VT25 1732 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 A2ML1A8K2U0 1454 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 SLC22A20A6NK97 555 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 CENPXA8MT69 81 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 H0YHG0 523 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 PLPP1O14494 284 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 NUPL2O15504 423 aaKnown RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 SRP72O76094 671 aaKnown RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 ETHE1O95571 254 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 C6orf47O95873 294 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 ARG1P05089 322 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 PRKACBP22694 351 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 PRPS1P60891 318 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 YWHAEP62258 255 aaKnown RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 MXD1Q05195 221 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 TSC22D1Q15714 1073 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 CCNJQ5T5M9 372 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 C6orf183Q5T699 404 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 ADNP2Q6IQ32 1131 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 SLC35D2Q76EJ3 337 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 ZNF547Q8IVP9 402 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 TMEM61Q8N0U2 210 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 OR2G3Q8NGZ4 309 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 MARC2Q969Z3 335 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 FOXC2Q99958 501 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 OR11A1Q9GZK7 315 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 MRM3Q9HC36 420 aaKnown RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 CCL28Q9NRJ3 127 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 ZNF107Q9UII5 783 aaPredicted RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 CLEC4EQ9ULY5 219 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 SETD1AO15047 1707 aaKnown RBP3.95□□□□□ -1.78
LINC00458-206ENST00000607494 SYCP2Q9BX26 1530 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 MAPK8IP3Q9UPT6 1336 aa3.95□□□□□ -1.78
LINC00458-206ENST00000607494 INO80Q9ULG1 1556 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ARHGAP35Q9NRY4 1499 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 TNRQ92752 1358 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 KLF18A0A0U1RQI7 1052 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 FAM168BA1KXE4 195 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 PSMB11A5LHX3 300 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 EPOPA6NHQ4 379 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 HSBP1L1C9JCN9 74 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 KRTAP4-16G5E9R7 235 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 TNFSF11O14788 317 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 SLC19A2O60779 497 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 UTS2O95399 124 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 TACSTD2P09758 323 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 CCNOP22674 350 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 CSKP41240 450 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 GPR4P46093 362 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 FGF8P55075 233 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ATP6V0D1P61421 351 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 RPS21P63220 83 aaKnown RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 TPRG1LQ5T0D9 272 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 UBE2UQ5VVX9 321 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 LINC00336Q6ZUF6 198 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 TMEM179Q6ZVK1 233 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ST13P4Q8IZP2 240 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 OR4F15Q8NGB8 312 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 OR10G9Q8NGN4 311 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 OR51F2Q8NH61 342 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 NEIL3Q8TAT5 605 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ITFG1Q8TB96 612 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ASZ1Q8WWH4 475 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 FAM131CQ96AQ9 280 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ATP6V1G3Q96LB4 118 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 NRIP2Q9BQI9 281 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 PATZ1Q9HBE1 687 aaKnown RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 DMAP1Q9NPF5 467 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 MTRF1LQ9UGC7 380 aaKnown RBP3.94□□□□□ -1.78
LINC00458-206ENST00000607494 ATP7AQ04656 1500 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 CLIP1P30622 1438 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 LRRK1Q38SD2 2015 aa3.94□□□□□ -1.78
LINC00458-206ENST00000607494 A2MP01023 1474 aa3.93□□□□□ -1.78
LINC00458-206ENST00000607494 RNF17Q9BXT8 1623 aaKnown RBP3.93□□□□□ -1.78
LINC00458-206ENST00000607494 A0A0G2JN53 185 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms