RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 LCN2P80188 198 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 C1orf94Q6P1W5 598 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 PGBD2Q6P3X8 592 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 TMEM179BQ7Z7N9 219 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 ZDHHC13Q8IUH4 622 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 OR13C2Q8NGS9 318 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 ZNF519Q8TB69 540 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 TAF15Q92804 592 aaKnown RBP eCLIP13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 KIF17Q9P2E2 1029 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 GPR160Q9UJ42 338 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 SLC22A23A1A5C7 686 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 ARRDC5A6NEK1 342 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 CLDN25C9JDP6 229 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 LCKP06239 509 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 OR8G3PP0DMU2 310 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 ANXA8P13928 327 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 GSTM3P21266 225 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 PRKACGP22612 351 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 FPR3P25089 353 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 FPR2P25090 351 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 RPL4P36578 427 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 RBMXP38159 391 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 AQP2P41181 271 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 SELENOVP59797 346 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 GLO1Q04760 184 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 TSPAN31Q12999 210 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 ATG16L2Q8NAA4 619 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 OR6X1Q8NH79 312 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 C11orf40Q8WZ69 217 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 FEVQ99581 238 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 INIPQ9NRY2 104 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 TMEM38BQ9NVV0 291 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 SLCO1C1Q9NYB5 712 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 TAS2R5Q9NYW4 299 aa13.94□□□□□ -0.18
SHKBP1-215ENST00000597649 A0A1W2PRG6 482 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 SAC3D1A6NKF1 404 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 CDC42EP2O14613 210 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 GATA3P23771 443 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 TEKQ02763 1124 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 RPL18Q07020 188 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 ALG10Q5BKT4 473 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 ZNF770Q6IQ21 691 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 TREML4Q6UXN2 200 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 SLC35D2Q76EJ3 337 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 HS3ST5Q8IZT8 346 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 PQLC1Q8N2U9 271 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 MOSPD2Q8NHP6 518 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 CCL17Q92583 94 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 RAB1CQ92928 201 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 CDH20Q9HBT6 801 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 MMP26Q9NRE1 261 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 DECR2Q9NUI1 292 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 ZNF69Q9UC07 566 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 HIF3AQ9Y2N7 669 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 WNK1Q9H4A3 2382 aa13.93□□□□□ -0.18
SHKBP1-215ENST00000597649 DHHO43323 396 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 TPD52L2O43399 206 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 NDUFB2O95178 105 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 SNAP29O95721 258 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 IGHV3-13P01766 116 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 F13BP05160 661 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 PRTN3P24158 256 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 GSSP48637 474 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 MELKQ14680 651 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 RCN1Q15293 331 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 HFEQ30201 348 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 SPRNQ5BIV9 151 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 KLF17Q5JT82 389 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 SMARCD3Q6STE5 483 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 DOK3Q7L591 496 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 CPEB3Q8NE35 698 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 DEFB108BQ8NET1 73 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 FANK1Q8TC84 345 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 ZNF48Q96MX3 618 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 GPA33Q99795 319 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 GAL3ST1Q99999 423 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 DGCR6LQ9BY27 220 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 RNF121Q9H920 327 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 UNKLQ9H9P5 680 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 SAP30LQ9HAJ7 183 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 SIGLEC7Q9Y286 467 aa13.92□□□□□ -0.18
SHKBP1-215ENST00000597649 DNAJC9-AS1A6NH13 148 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 MCIDASD6RGH6 385 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 SPRY3O43610 288 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 PTP4A3O75365 173 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 IGHV1-46P01743 117 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 MMP7P09237 267 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 QDPRP09417 244 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 ZNF81P51508 661 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 MMP15P51511 669 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 CTXN1P60606 82 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 COX10Q12887 443 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 RPL13AP3Q6NVV1 102 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 TMEM53Q6P2H8 277 aa13.91□□□□□ -0.18
SHKBP1-215ENST00000597649 RASSF6Q6ZTQ3 369 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms