RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 OR5AS1Q8N127 324 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 OR6V1Q8N148 313 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 CYB561A3Q8NBI2 242 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 OR1F12Q8NHA8 337 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 CCL17Q92583 94 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 CCDC124Q96CT7 223 aaKnown RBP10.65□□□□□ -0.7
SMAD3-208ENST00000558827 CMBLQ96DG6 245 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 DCLRE1CQ96SD1 692 aaKnown RBP10.65□□□□□ -0.7
SMAD3-208ENST00000558827 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-208ENST00000558827 ELOVL3Q9HB03 270 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 NDE1Q9NXR1 346 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 PTTG3PQ9NZH4 202 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 U3KQV3 271 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 SVEP1Q4LDE5 3571 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 IGLV1-36A0A0B4J1U3 117 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 IGHV3-64DA0A0J9YX35 117 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 PLSCR5A0PG75 271 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 OR6C68A6NDL8 312 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 TVP23AA6NH52 213 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 AHCYL1O43865 530 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 TXNDC12O95881 172 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 FAM107AO95990 144 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 GASTP01350 101 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 MT-ND5P03915 603 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 FPR3P25089 353 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
SMAD3-208ENST00000558827 MMP15P51511 669 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 CDH15P55291 814 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 TMEM33P57088 247 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD3-208ENST00000558827 AQP6Q13520 282 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 MOGQ16653 247 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 SYT9Q86SS6 491 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 ADCK1Q86TW2 530 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 DHFR2Q86XF0 187 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 OR51L1Q8NGJ5 315 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 ZNRF4Q8WWF5 429 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 BTBD10Q9BSF8 475 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 PLA2G12AQ9BZM1 189 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 WDR76Q9H967 626 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 ACTR3BQ9P1U1 418 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 TMEFF2Q9UIK5 374 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-208ENST00000558827 NDRG4Q9ULP0 352 aaKnown RBP10.64□□□□□ -0.71
SMAD3-208ENST00000558827 LYVE1Q9Y5Y7 322 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 LHFPL6Q9Y693 200 aa10.64□□□□□ -0.71
SMAD3-208ENST00000558827 ISPDA4D126 451 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 PHF1O43189 567 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-208ENST00000558827 CCNB2O95067 398 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 SOX14O95416 240 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 TFP02787 698 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 GAAP10253 952 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 SRP14P37108 136 aaKnown RBP10.63□□□□□ -0.71
SMAD3-208ENST00000558827 IFNGR2P38484 337 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 CRYBB2P43320 205 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 MNAT1P51948 309 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 LMO4P61968 165 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 TEKQ02763 1124 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 TSPAN31Q12999 210 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 PCGF3Q3KNV8 242 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 MBNL2Q5VZF2 373 aaKnown RBP10.63□□□□□ -0.71
SMAD3-208ENST00000558827 OR2T2Q6IF00 324 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 ARL9Q6T311 187 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 UNQ6126/PRO20091Q6UXV3 157 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 ZNF620Q6ZNG0 422 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 Q6ZR03 302 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 CXXC5Q7LFL8 322 aaKnown RBP10.63□□□□□ -0.71
SMAD3-208ENST00000558827 NAA40Q86UY6 237 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 AQP11Q8NBQ7 271 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 OR2Z1Q8NG97 314 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 OR8D4Q8NGM9 314 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 THTPAQ9BU02 230 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 UBAP1Q9NZ09 502 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 LPAR3Q9UBY5 353 aa10.63□□□□□ -0.71
SMAD3-208ENST00000558827 PURGQ9UJV8 347 aaKnown RBP10.63□□□□□ -0.71
SMAD3-208ENST00000558827 DYSFO75923 2080 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 OR6C6A6NF89 314 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 RGS9O75916 674 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-208ENST00000558827 COX5BP10606 129 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 CRABP1P29762 137 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 LSM6P62312 80 aaKnown RBP10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TNFAIP6P98066 277 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TRIM25Q14258 630 aaKnown RBP10.62□□□□□ -0.71
SMAD3-208ENST00000558827 HFEQ30201 348 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 MTX3Q5HYI7 312 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 CFAP77Q6ZQR2 320 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 NPEPL1Q8NDH3 523 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 OR9Q1Q8NGQ5 310 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 HPS1Q92902 700 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 ELMOD3Q96FG2 381 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 CDADC1Q9BWV3 514 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TSSK6Q9BXA6 273 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
SMAD3-208ENST00000558827 TBCCD1Q9NVR7 557 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms