RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TOR1AIP1Q5JTV8 583 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 DDI2Q5TDH0 399 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 ANKRD22Q5VYY1 191 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SLC22A10Q63ZE4 541 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SLC25A25Q6KCM7 469 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 PPP1R2P3Q6NXS1 205 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 XKRXQ6PP77 449 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 TMEM205Q6UW68 189 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SPNS3Q6ZMD2 512 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 Q6ZPB1 254 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 DGAT2L6Q6ZPD8 337 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 LUZP2Q86TE4 346 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SLC22A16Q86VW1 577 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 VSTM4Q8IW00 320 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SERPINA12Q8IW75 414 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 CYP4Z2PQ8N1L4 340 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 TMEM251Q8N6I4 163 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 OR8K1Q8NGG5 319 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 OR9A1PQ8NGU1 263 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 FAM57AQ8TBR7 257 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 FNDC8Q8TC99 324 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 NCLNQ969V3 563 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 RERGQ96A58 199 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 C14orf79Q96F83 325 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 RMND5BQ96G75 393 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 CCDC42Q96M95 316 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 C9orf85Q96MD7 179 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 OR2A5Q96R48 311 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 CYTH2Q99418 400 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 GPR21Q99679 349 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 TTTY12Q9BZ98 90 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 NAT10Q9H0A0 1025 aaKnown RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 EHD1Q9H4M9 534 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 EXO5Q9H790 373 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF702PQ9H963 129 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 LRRC40Q9H9A6 602 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SYTL2Q9HCH5 934 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 ZCCHC3Q9NUD5 404 aaKnown RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 C14orf105Q9NVL8 296 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 UTP6Q9NYH9 597 aaKnown RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 LCMT1Q9UIC8 334 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 NXT1Q9UKK6 140 aaKnown RBP2.06□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF835Q9Y2P0 537 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 L3MBTL1Q9Y468 752 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 SVILO95425 2214 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 MTORP42345 2549 aa2.06□□□□□ -2.08
SCFD1-219ENST00000556413 TACC2O95359 2948 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 RYR3Q15413 4870 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CCDC88CQ9P219 2028 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PKDREJQ9NTG1 2253 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 IGLV8-61A0A075B6I0 122 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 IGLV3-12A0A075B6K2 115 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 C15orf38-AP3S2A0A0A6YYH1 394 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 A0A1W2PRQ8 180 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 NCF1BA6NI72 391 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 USP27XA6NNY8 438 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 WASHC1A8K0Z3 465 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 NCF1CA8MVU1 366 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 E5RI56 91 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 SLC17A2O00624 439 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PRMT5O14744 637 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CHST10O43529 356 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 OR1F1O43749 312 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 GMFGO60234 142 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 VPS26AO75436 327 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CTAG2O75638 210 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 SERF1AO75920 110 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 OR2J2O76002 312 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PDE5AO76074 875 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 IFNA16P05015 189 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CT45A10P0DMU9 189 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 NCF1P14598 390 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 RPS2P15880 293 aaKnown RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PSMB1P20618 241 aaKnown RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 DPP4P27487 766 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 RPL22P35268 128 aaKnown RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 SLC1A1P43005 524 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PLA2G16P53816 162 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 RAG2P55895 527 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 RWDD2BP57060 319 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 TPM4P67936 248 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 BTN3A2P78410 334 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 MRPS25P82663 173 aaKnown RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CCZ1BP86790 482 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CCZ1P86791 482 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-219ENST00000556413 SRYQ05066 204 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ASPHQ12797 758 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 NPRL3Q12980 569 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PDE7AQ13946 482 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 INAQ16352 499 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 GPAT3Q53EU6 434 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 C1orf185Q5T7R7 199 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF470Q6ECI4 717 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 PRMT9Q6P2P2 845 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 C11orf88Q6PI97 169 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ATRAIDQ6UW56 229 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ARSKQ6UWY0 536 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 CENPUQ71F23 418 aa2.05□□□□□ -2.08
SCFD1-219ENST00000556413 ASRGL1Q7L266 308 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms