RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 RER1O15258 196 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SGCEO43556 437 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 PTP4A3O75365 173 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ZNF682O95780 498 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 CYB5R3P00387 301 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 IFNW1P05000 195 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 CD14P08571 375 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 PPIAL4FP0DN26 164 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 COX5BP10606 129 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 NCK1P16333 377 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 GATA3P23771 443 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 FPR2P25090 351 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 LIPAP38571 399 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 PMELP40967 661 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 LIMS1P48059 325 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ARHGDIAP52565 204 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 BTG1P62324 171 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 LIPEQ05469 1076 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 RSPO1Q2MKA7 263 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ZBED5Q49AG3 693 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 FAM205BPQ63HN1 556 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 OR2T2Q6IF00 324 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ZNF730Q6ZMV8 503 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 TMPRSS11FQ6ZWK6 438 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 MBOAT2Q6ZWT7 520 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 DOK3Q7L591 496 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 HDXQ7Z353 690 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 OR10AD1Q8NGE0 317 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SGMS2Q8NHU3 365 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC7A13Q8TCU3 470 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ACOT11Q8WXI4 607 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 FAM46AQ96IP4 442 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 TSSK2Q96PF2 358 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 DIRC2Q96SL1 478 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 GPA33Q99795 319 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SIKE1Q9BRV8 207 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 SYT4Q9H2B2 425 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 WDR76Q9H967 626 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 DDX28Q9NUL7 540 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 GID8Q9NWU2 228 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 PTTG3PQ9NZH4 202 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 ASH2LQ9UBL3 628 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 NUP50Q9UKX7 468 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 NDRG4Q9ULP0 352 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 PPP1R3CQ9UQK1 317 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 AUP1Q9Y679 476 aa9.69□□□□□ -0.86
PRPF40B-212ENST00000551111 MDFIC2A0A1B0GVS7 189 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 GMNCA6NCL1 334 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 CEACAM18A8MTB9 384 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 SOCS2O14508 198 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 MLNRO43193 412 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC16A7O60669 478 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 SERPINA1P01009 418 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 WNT2P09544 360 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 NR2C1P13056 603 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 H2AFXP16104 143 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ANOS1P23352 680 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 PRTN3P24158 256 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 CDKN2AP42771 156 aaKnown RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 GUCA1AP43080 201 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 MMP16P51512 607 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 PAX8Q06710 450 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 SEC23BQ15437 767 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 TMEM155Q4W5P6 130 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ARMCX4Q5H9R4 360 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 CORO6Q6QEF8 472 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 UNQ6126/PRO20091Q6UXV3 157 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 CBLL1Q75N03 491 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 NAA40Q86UY6 237 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 C1orf174Q8IYL3 243 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 KLHL36Q8N4N3 616 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 C19orf18Q8NEA5 215 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 FNDC8Q8TC99 324 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 POP5Q969H6 163 aaKnown RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 DACT3Q96B18 629 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ZMYND19Q96E35 227 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 HSH2DQ96JZ2 352 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 NUAK2Q9H093 628 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 NMNAT1Q9HAN9 279 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 TMEM165Q9HC07 324 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 PLEK2Q9NYT0 353 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 GRHPRQ9UBQ7 328 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 CGGBP1Q9UFW8 167 aaPredicted RBP9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 SIGLEC7Q9Y286 467 aa9.68□□□□□ -0.86
PRPF40B-212ENST00000551111 VWFP04275 2813 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 A8MXK9 166 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 DIRAS1O95057 198 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 HLA-DPB1P04440 258 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 GSTM3P21266 225 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 GSK3BP49841 420 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC7A2P52569 658 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms