RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 ELAVL2Q12926 359 aaKnown RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 GPR176Q14439 515 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 SHHQ15465 462 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 TIGD3Q6B0B8 471 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 MBOAT1Q6ZNC8 495 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 ZNF600Q6ZNG1 722 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 FAM122BQ7Z309 247 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 ZNF571Q7Z3V5 609 aaPredicted RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 COMTD1Q86VU5 262 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 SKA3Q8IX90 412 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 PUSL1Q8N0Z8 303 aaKnown RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 DEFB123Q8N688 67 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 ZNF502Q8TBZ5 544 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 SMARCD2Q92925 531 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 OR5M11Q96RB7 305 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 NAT9Q9BTE0 207 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 ZYG11BQ9C0D3 744 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 FAM107BQ9H098 131 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 PSTPIP2Q9H939 334 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 MRPL47Q9HD33 250 aaKnown RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 CCDC59Q9P031 241 aaKnown RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 ABCD2Q9UBJ2 740 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 UBQLN1Q9UMX0 589 aaKnown RBP4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 V9GY05 133 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 NID2Q14112 1375 aa4.48□□□□□ -1.69
AL355112.1-201ENST00000550309 KIAA1671Q9BY89 1806 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 TRAV6A0A075B6T7 132 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 GSTTP1A0A1W2PQM5 241 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 GOLGA6L19H0YKK7 550 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 M0QZ92 97 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 SHOX2O60902 331 aaPredicted RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ZNF253O75346 499 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 KBTBD11O94819 623 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 VENTXO95231 258 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 SERPINA5P05154 406 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 KRT16P08779 473 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ACSM4P0C7M7 580 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ZNF286BP0CG31 522 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CFC1P0CG37 223 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 IGLL1P15814 213 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CFHR2P36980 270 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 GPR1P46091 355 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CCL23P55773 120 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ADARB1P78563 741 aaKnown RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ECH1Q13011 328 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 XRCC4Q13426 336 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 NCF4Q15080 339 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 TGIF1Q15583 401 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 AANATQ16613 207 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 KLF17Q5JT82 389 aaPredicted RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 METTL7BQ6UX53 244 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 LHFPL3Q86UP9 236 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 PPP1R27Q86WC6 154 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 HIPK1Q86Z02 1210 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ST13P4Q8IZP2 240 aaPredicted RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ARHGAP18Q8N392 663 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CADM2Q8N3J6 435 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 OR56A4Q8NGH8 313 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 NEIL2Q969S2 332 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 APH1AQ96BI3 265 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 OPRPNQ99935 248 aaPredicted RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 KCTD14Q9BQ13 255 aaPredicted RBP4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 ECSITQ9BQ95 431 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 LRRC61Q9BV99 259 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 PRRG3Q9BZD7 231 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 NTN4Q9HB63 628 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 C6orf50Q9HD87 102 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 CEP290O15078 2479 aa4.47□□□□□ -1.69
AL355112.1-201ENST00000550309 TRIOBPQ9H2D6 2365 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 SHISA9B4DS77 424 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 CDX4O14627 284 aaPredicted RBP4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 MGRN1O60291 552 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 SMC2O95347 1197 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 PGAM2P15259 253 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 TCN1P20061 433 aaPredicted RBP4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 GABRR2P28476 465 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 NTSP30990 170 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 LCN1P31025 176 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 UGT1A3P35503 534 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 TNFSF9P41273 254 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 NPBWR2P48146 333 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ACTA2P62736 377 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ACTG2P63267 376 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ACTC1P68032 377 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ACTA1P68133 377 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 SP4Q02446 784 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ZNF33AQ06730 810 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 CD47Q08722 323 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 TRAM2Q15035 370 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ANGPT1Q15389 498 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 UBE2SQ16763 222 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 PDPK2PQ6A1A2 396 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 C1orf94Q6P1W5 598 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ERICH5Q6P6B1 374 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 DEFB128Q7Z7B8 93 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ZNF546Q86UE3 836 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 C17orf82Q86X59 251 aaPredicted RBP4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 ZBED8Q8IZ13 594 aa4.46□□□□□ -1.7
AL355112.1-201ENST00000550309 RDH10Q8IZV5 341 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms