RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 NRBF2Q96F24 287 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 SMIM10Q96HG1 83 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 CHID1Q9BWS9 393 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 GABARAPL3Q9BY60 117 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 UBE2ZQ9H832 354 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 SPACA1Q9HBV2 294 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 ANKHQ9HCJ1 492 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 CCL28Q9NRJ3 127 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 TMEM9Q9P0T7 183 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 CTSFQ9UBX1 484 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF629Q9UEG4 869 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 MTRF1LQ9UGC7 380 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 CLEC4EQ9ULY5 219 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 CSAG2Q9Y5P2 127 aa2.85□□□□□ -1.95
TRAPPC13-208ENST00000505553 ARHGEF11O15085 1522 aa2.84□□□□□ -1.95
TRAPPC13-208ENST00000505553 GAKO14976 1311 aa2.84□□□□□ -1.95
TRAPPC13-208ENST00000505553 PCNX3Q9H6A9 2034 aa2.84□□□□□ -1.95
TRAPPC13-208ENST00000505553 PLEKHG1Q9ULL1 1385 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 GOLGA8QA0A0J9YX86 632 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 A0A1W2PQ72 361 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 PSMB11A5LHX3 300 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 HIDE1A8MVS5 230 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 HACD1B0YJ81 288 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 MMP23AO75900 390 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 GIPP09681 153 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 IGHV3-43DP0DP04 118 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TDGF1P13385 188 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 GGT1P19440 569 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 CSNK2A2P19784 350 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 RAB3BP20337 219 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 WARSP23381 471 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 ARR3P36575 388 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 CSNK1DP48730 415 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TDGF1P3P51864 188 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 FGF8P55075 233 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZNF121P58317 390 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TAS2R39P59534 338 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TEX43Q6ZNM6 134 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 ABHD13Q7L211 337 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 RALGPS2Q86X27 583 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 SYS1Q8N2H4 156 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR52E2Q8NGJ4 325 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 BAALCQ8WXS3 180 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 CACNG8Q8WXS5 425 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TFGQ92734 400 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 RCN3Q96D15 328 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 AURKBQ96GD4 344 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 TRNT1Q96Q11 434 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 GFRA4Q9GZZ7 299 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 SYT4Q9H2B2 425 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 CLMPQ9H6B4 373 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZNF229Q9UJW7 825 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 ST3GAL6Q9Y274 331 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 V9GYY9 64 aa2.84□□□□□ -1.96
TRAPPC13-208ENST00000505553 MRC2Q9UBG0 1479 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 SBNO1A3KN83 1393 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CEMIPQ8WUJ3 1361 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 JCADQ9P266 1359 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 EPOPA6NHQ4 379 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 IQCF5A8MTL0 148 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 K7EMT4 169 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 PEX7O00628 323 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 NME4O00746 187 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 PRMT5O14744 637 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 ERI3O43414 337 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 BCL2L11O43521 198 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CDC40O60508 579 aaKnown RBP eCLIP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CATP04040 527 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 RETP07949 1114 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 RHOCP08134 193 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 SERPINB8P50452 374 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 ATP5J2P56134 94 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 AP1S2P56377 157 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 TAS2R60P59551 318 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLC35B1P78383 322 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLC39A6Q13433 755 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 ART3Q13508 389 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 SGCAQ16586 387 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 RFX4Q33E94 735 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 C6orf89Q6UWU4 347 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 C12orf54Q6X4T0 127 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 NDUFAF7Q7L592 441 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 GTSCR1Q86UQ5 136 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CBLN2Q8IUK8 224 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 FAM71AQ8IYT1 594 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 GPD1LQ8N335 351 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 LINC00469Q8N7U9 141 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CHST4Q8NCG5 386 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR10J6PQ8NGY7 276 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CLHC1Q8NHS4 586 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 ANGPTL6Q8NI99 470 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR51E1Q8TCB6 317 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 MRAPQ8TCY5 172 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 FAM222BQ8WU58 562 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 PDCD6IPQ8WUM4 868 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 RPUSD4Q96CM3 377 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
TRAPPC13-208ENST00000505553 CENPNQ96H22 339 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms