RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 RNPS1Q15287 305 aaKnown RBP9.09□□□□□ -0.95
HDAC3-214ENST00000495485 STK11Q15831 433 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 IDNKQ5T6J7 187 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FAM131AQ6UXB0 335 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 LRRN1Q6UXK5 716 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 BAIAP2L2Q6UXY1 529 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 GGNQ86UU5 652 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 C20orf196Q8IYI0 205 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 MFSD4AQ8N468 514 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 RFLNBQ8N5W9 214 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 PARP16Q8N5Y8 322 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 TMEM251Q8N6I4 163 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 GDPD1Q8N9F7 314 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 Q8NA96 180 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 GJC3Q8NFK1 279 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CPT1CQ8TCG5 803 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 RNF133Q8WVZ7 376 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 TSEN15Q8WW01 171 aaKnown RBP9.09□□□□□ -0.95
HDAC3-214ENST00000495485 ADGRG7Q96K78 797 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 OR2M2Q96R28 347 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 PDCD1LG2Q9BQ51 273 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 BARHL1Q9BZE3 327 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 SP140LQ9H930 580 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 RNF122Q9H9V4 155 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CENPMQ9NSP4 180 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FRRS1LQ9P0K9 344 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 COMMD3Q9UBI1 195 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CYB5R1Q9UHQ9 305 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 GTF2A1LQ9UNN4 478 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 LRP12Q9Y561 859 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 USP9XQ93008 2570 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-214ENST00000495485 MYO7BQ6PIF6 2116 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 TRBV5-5A0A0J9YX44 114 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 TMEM269A0A1B0GVZ9 245 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 MEGF11A6BM72 1044 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 OR4C45A6NMZ5 311 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 FAM166BA8MTA8 275 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 SMAD9O15198 467 aaKnown RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 MAGEB4O15481 346 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 LRRTM2O43300 516 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 UPK1BO75841 260 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 KRT33AO76009 404 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 GLSO94925 669 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 FARS2O95363 451 aaKnown RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 GPANK1O95872 356 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 CLEC2LP0C7M8 214 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 EDN3P14138 238 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF24P17028 368 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 APEX1P27695 318 aaKnown RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 MAGEA5P43359 124 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 MMP16P51512 607 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 CLDN20P56880 219 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 SCAND1P57086 179 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 PCBD1P61457 104 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 MRPS34P82930 218 aaKnown RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 RBPJQ06330 500 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 SF3B4Q15427 424 aaKnown RBP eCLIP9.08□□□□□ -0.964e-12■■■■■ 57.7
HDAC3-214ENST00000495485 SGCAQ16586 387 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 RIPPLY2Q5TAB7 128 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 BCL2L15Q5TBC7 163 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 ABLIM2Q6H8Q1 611 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 SFXN4Q6P4A7 337 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 LRFN4Q6PJG9 635 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 ABHD12BQ7Z5M8 362 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 LUZP2Q86TE4 346 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 LRRC28Q86X40 367 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 CATSPERDQ86XM0 798 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 CCDC54Q8NEL0 328 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 C15orf40Q8WUR7 153 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 TMEM45BQ96B21 275 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 SLAMF6Q96DU3 332 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 DERL3Q96Q80 235 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 OR14A2Q96R54 314 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 ATF6BQ99941 703 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 RBM24Q9BX46 236 aaKnown RBP9.08□□□□□ -0.96
HDAC3-214ENST00000495485 ABCB9Q9NP78 766 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 NOX4Q9NPH5 578 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 POLE4Q9NR33 117 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 DAPK2Q9UIK4 370 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 HHLA2Q9UM44 414 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 DHDHQ9UQ10 334 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 KLHDC2Q9Y2U9 406 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 FLVCR1Q9Y5Y0 555 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 V9GY05 133 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
HDAC3-214ENST00000495485 TRGV5A0A0B4J1U4 118 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 IGHV3-15A0A0B4J1V0 119 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 PINLYPA6NC86 204 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ANXA2P2A6NMY6 339 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF814B7Z6K7 855 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 MRPL33O75394 65 aaKnown RBP9.07□□□□□ -0.96
HDAC3-214ENST00000495485 C1QL1O75973 258 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 MPZL1O95297 269 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ISG15P05161 165 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ANXA2P07355 339 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms