RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 FAM107AO95990 144 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 COX5BP10606 129 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 NR2C1P13056 603 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 ITGA2P17301 1181 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 FPR3P25089 353 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 CRYBB2P43320 205 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 MAGEA2P43356 314 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 HTR5AP47898 357 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 ZNF81P51508 661 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 PRSS12P56730 875 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 TMEM33P57088 247 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 PCBD1P61457 104 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 LSM6P62312 80 aaKnown RBP10.7□□□□□ -0.7
HSPG2-212ENST00000493940 LEG1Q6P5S2 330 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 TMEM154Q6P9G4 183 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 LYPD4Q6UWN0 246 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 ZNF620Q6ZNG0 422 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 USP51Q70EK9 711 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 NAA40Q86UY6 237 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 GLB1L2Q8IW92 636 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 NPEPL1Q8NDH3 523 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 SDR9C7Q8NEX9 313 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 FANK1Q8TC84 345 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 GNPDA2Q8TDQ7 276 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 SHARPINQ9H0F6 387 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 LPAR2Q9HBW0 351 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 MRPL22Q9NWU5 206 aaKnown RBP10.7□□□□□ -0.7
HSPG2-212ENST00000493940 SLCO1C1Q9NYB5 712 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 KCNS2Q9ULS6 477 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 IGHV1-69-2A0A0G2JMI3 117 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 BHLHE40O14503 412 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 UBOX5O94941 541 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 AVPP01185 164 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 RPS27P42677 84 aaKnown RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 RPS6KA3P51812 740 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 MRPS11P82912 194 aaKnown RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 MVKQ03426 396 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 TSPAN31Q12999 210 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 AQP6Q13520 282 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 HLXQ14774 488 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 LCN8Q6JVE9 175 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 LINC00346Q8IVM7 164 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 LINC01356Q8N9X3 169 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 SLC26A10Q8NG04 563 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 OR1F12Q8NHA8 337 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 HPS1Q92902 700 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 CMBLQ96DG6 245 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 IFT27Q9BW83 186 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 RPRD1BQ9NQG5 326 aaKnown RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 TBCCD1Q9NVR7 557 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 PLEK2Q9NYT0 353 aa10.69□□□□□ -0.7
HSPG2-212ENST00000493940 EIF3KQ9UBQ5 218 aaKnown RBP10.69□□□□□ -0.7
HSPG2-212ENST00000493940 TNFRSF11BO00300 401 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 ACOT8O14734 319 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 PHF1O43189 567 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 DEAF1O75398 565 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 ABHD16AO95870 558 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 GCH1P30793 250 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SLC6A6P31641 620 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 PYCR1P32322 319 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 GGT2P36268 569 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 GUCA1AP43080 201 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CENPAP49450 140 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SMIM11AP58511 58 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SELENOVP59797 346 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SCRN3Q0VDG4 424 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CDK5R2Q13319 367 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 TRIM25Q14258 630 aaKnown RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 KRTAP27-1Q3LI81 207 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SPATS1Q496A3 300 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CLEC12AQ5QGZ9 265 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 TMEM179BQ7Z7N9 219 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 ADCK1Q86TW2 530 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 ZBTB46Q86UZ6 589 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CYB561A3Q8NBI2 242 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 CCDC197Q8NCU1 140 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 OR52E2Q8NGJ4 325 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 OR10S1Q8NGN2 331 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 OR4Q3Q8NH05 313 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 SNX33Q8WV41 574 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 MCUR1Q96AQ8 359 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 HAVCR1Q96D42 359 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 WDR76Q9H967 626 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 IL20Q9NYY1 176 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
HSPG2-212ENST00000493940 WIPI2Q9Y4P8 454 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 U3KQV3 271 aa10.68□□□□□ -0.7
HSPG2-212ENST00000493940 H0YL77 283 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 ADH4P08319 380 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 TEKQ02763 1124 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
HSPG2-212ENST00000493940 PCGF3Q3KNV8 242 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 KRTAP24-1Q3LI83 254 aa10.67□□□□□ -0.7
HSPG2-212ENST00000493940 SLC18B1Q6NT16 456 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms