RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 NUBPLQ8TB37 319 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 FGF14Q92915 247 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 TSLPQ969D9 159 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 ABHD6Q9BV23 337 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 IL23AQ9NPF7 189 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 GMEB2Q9UKD1 530 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 NPIPA1Q9UND3 350 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 SLC33A1O00400 549 aaPredicted RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 SYT7O43581 403 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CT45A8P0DMV1 189 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CT45A9P0DMV2 189 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 TPT1P13693 172 aaKnown RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 RPA2P15927 270 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CTLA4P16410 223 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 PLCXD2Q0VAA5 305 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CEBPEQ15744 281 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 MAMDC2Q7Z304 686 aaPredicted RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 LINC00518Q8N0U6 118 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 CLEC1AQ8NC01 280 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 NANPQ8TBE9 248 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 LMF2Q9BU23 707 aaKnown RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 FANCFQ9NPI8 374 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 RPS10P5Q9NQ39 176 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 MED29Q9NX70 200 aa11.46□□□□□ -0.58
VPS52-218ENST00000482399 VSX1Q9NZR4 365 aaPredicted RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 MRPS18BQ9Y676 258 aaKnown RBP11.46□□□□□ -0.58
VPS52-218ENST00000482399 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 ABCD4O14678 606 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 BCL2L11O43521 198 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ICOSLGO75144 302 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 MED6O75586 246 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 RPS4Y1P22090 263 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 CD80P33681 288 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 CD96P40200 585 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 CASRP41180 1078 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 EMP2P54851 167 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 GLO1Q04760 184 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 RAB11FIP2Q7L804 512 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ADAD2Q8NCV1 583 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 TMPRSS13Q9BYE2 586 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 EXOSC3Q9NQT5 275 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 PRODH2Q9UF12 536 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 CYB5R1Q9UHQ9 305 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 OR6C76A6NM76 312 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 SULT1C2O00338 296 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 AQP8O94778 261 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 SNRNP70P08621 437 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 PPIAP62937 165 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 SERTAD2Q14140 314 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 NSDHLQ15738 373 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ADGRE4PQ86SQ3 457 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ZNF679Q8IYX0 411 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 OTOSQ8NHW6 89 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 CD300LFQ8TDQ1 290 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
VPS52-218ENST00000482399 VSTM2LQ96N03 204 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 S100A13Q99584 98 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 PRRT1Q99946 306 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 PIGMQ9H3S5 423 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 RASL12Q9NYN1 266 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 CYP8B1Q9UNU6 501 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 RNF215Q9Y6U7 377 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 ZNF254O75437 659 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 WDPCPO95876 746 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 RAB6AP20340 208 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 COL9A1P20849 921 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 HSD11B1P28845 292 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 MGAT2Q10469 447 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 NUP54Q7Z3B4 507 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 OR10Z1Q8NGY1 313 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 OR4K15Q8NH41 348 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 BMFQ96LC9 184 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 LRP12Q9Y561 859 aa11.45□□□□□ -0.58
VPS52-218ENST00000482399 MYO15AQ9UKN7 3530 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 IGHV3-20A0A0C4DH32 117 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 TCRBV21S2A2A0A5A6 115 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 SIGLEC6O43699 453 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 AMY2BP19961 511 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 MPGP29372 298 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 SLC6A9P48067 706 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 CLDN6P56747 220 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 CLEC9AQ6UXN8 241 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 TMPPEQ6ZT21 453 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 SLC16A13Q7RTY0 426 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 ANGPTL5Q86XS5 388 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 OR5M8Q8NGP6 311 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.44□□□□□ -0.58
VPS52-218ENST00000482399 TLNRD1Q9H1K6 362 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 VSIG4Q9Y279 399 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 LSM5Q9Y4Y9 91 aaKnown RBP11.44□□□□□ -0.58
VPS52-218ENST00000482399 COL4A3Q01955 1670 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 IGKV1D-42A0A075B6H8 117 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms