RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CBLL1Q75N03 491 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 FAM122BQ7Z309 247 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 ZNF283Q8N7M2 679 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 FAM156AQ8NDB6 213 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 DEFB108BQ8NET1 73 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 DVL3Q92997 716 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 FAM46AQ96IP4 442 aaKnown RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 NDEL1Q9GZM8 345 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 PATZ1Q9HBE1 687 aaKnown RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 DDX28Q9NUL7 540 aaKnown RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 ASH2LQ9UBL3 628 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 PPP1R3CQ9UQK1 317 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 PPIAL4EA0A075B759 164 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 PPIAL4CA0A0B4J2A2 164 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 PPIAL4DF5H284 164 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 TRAPPC2LH3BP13 241 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 NME4O00746 187 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 IMPA2O14732 288 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 SLC16A7O60669 478 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 PPIAL4FP0DN26 164 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 TUBG1P23258 451 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 SLC7A2P52569 658 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 BTG1P62324 171 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 ZMYND11Q15326 602 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 TMEM155Q4W5P6 130 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 CYP4Z1Q86W10 505 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 OR5AS1Q8N127 324 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 SIGLECL1Q8N7X8 197 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 POP5Q969H6 163 aaKnown RBP17.74■□□□□ 0.43
COL9A3-207ENST00000467819 OR2V2Q96R30 315 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 SYT4Q9H2B2 425 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 NTN4Q9HB63 628 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 TUBG2Q9NRH3 451 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 IL19Q9UHD0 177 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 TMEM5Q9Y2B1 443 aa17.74■□□□□ 0.43
COL9A3-207ENST00000467819 COA3Q9Y2R0 106 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-207ENST00000467819 SLC22A2O15244 555 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 SURF4O15260 269 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 AHCYL1O43865 530 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 GUCY1A3Q02108 690 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 ZNF154Q13106 437 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 RBMS3Q6XE24 437 aaKnown RBP17.73■□□□□ 0.43
COL9A3-207ENST00000467819 LRRC28Q86X40 367 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-207ENST00000467819 SGMS2Q8NHU3 365 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 RP9Q8TA86 221 aaKnown RBP17.73■□□□□ 0.43
COL9A3-207ENST00000467819 SLC7A13Q8TCU3 470 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 FAM162AQ96A26 154 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 HAVCR1Q96D42 359 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 COG8Q96MW5 612 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 SIGLEC11Q96RL6 698 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 NMNAT1Q9HAN9 279 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-207ENST00000467819 PTTG3PQ9NZH4 202 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 IL20RAQ9UHF4 553 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 AUP1Q9Y679 476 aa17.73■□□□□ 0.43
COL9A3-207ENST00000467819 OR6C6A6NF89 314 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 SOCS2O14508 198 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 KHDRBS3O75525 346 aaKnown RBP17.72■□□□□ 0.43
COL9A3-207ENST00000467819 NDUFB2O95178 105 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 DBHP09172 617 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 COX4I1P13073 169 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 NCK1P16333 377 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ZNF12P17014 697 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 SDHAP31040 664 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 SLC6A9P48067 706 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 GSK3BP49841 420 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 CCDC92Q53HC0 331 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-207ENST00000467819 FGD3Q5JSP0 725 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 TSEN54Q7Z6J9 526 aaKnown RBP17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-207ENST00000467819 GLB1L2Q8IW92 636 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ATG16L2Q8NAA4 619 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 OR1F12Q8NHA8 337 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 PTP4A1Q93096 173 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 DUX5Q96PT3 197 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ANKRD19PQ9H560 264 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ZNF69Q9UC07 566 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 NUP50Q9UKX7 468 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 SIGLEC7Q9Y286 467 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 POLR1DQ9Y2S0 133 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 ENPP4Q9Y6X5 453 aa17.72■□□□□ 0.43
COL9A3-207ENST00000467819 F5H0A9 414 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 RER1O15258 196 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 MDH2P40926 338 aaKnown RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 MMP16P51512 607 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 LSM6P62312 80 aaKnown RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 HLXQ14774 488 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 ESCO2Q56NI9 601 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 KLF17Q5JT82 389 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 OR10AD1Q8NGE0 317 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 MRI1Q9BV20 369 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 C1QTNF5Q9BXJ0 243 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 POLR3KQ9Y2Y1 108 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-207ENST00000467819 PCDHGB1Q9Y5G3 927 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 INSIG2Q9Y5U4 225 aa17.71■□□□□ 0.43
COL9A3-207ENST00000467819 PKD1L1Q8TDX9 2849 aa17.71■□□□□ 0.42
COL9A3-207ENST00000467819 A8MXK9 166 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 TMEM178BH3BS89 294 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 GPANK1O95872 356 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 H1F0P07305 194 aaKnown RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 RAC2P15153 192 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms