RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 RAB39BQ96DA2 213 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 TRIM15Q9C019 465 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 NUAK2Q9H093 628 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 PLEK2Q9NYT0 353 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 COA3Q9Y2R0 106 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 GRIP1Q9Y3R0 1128 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 OR6C6A6NF89 314 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 H7C1C5 153 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 SOCS2O14508 198 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ARPC2O15144 300 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 SURF4O15260 269 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 DOK2O60496 412 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 RENP00797 406 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 NGFP01138 241 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 IGHV1-46P01743 117 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 KITLGP21583 273 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 TNFSF4P23510 183 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 NOS3P29474 1203 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 IL2RGP31785 369 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 HTR5AP47898 357 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 LMO4P61968 165 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 LCN6P62502 163 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 SPIBQ01892 262 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 GLO1Q04760 184 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 TSPAN31Q12999 210 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ECH1Q13011 328 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 CDK5R2Q13319 367 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ALKBH6Q3KRA9 238 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 SLC36A3Q495N2 470 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 OR51F2Q8NH61 342 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 RASD2Q96D21 266 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 NSL1Q96IY1 281 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ERMAPQ96PL5 475 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 SOX7Q9BT81 388 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 EMC7Q9NPA0 242 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 ARL8BQ9NVJ2 186 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
NIF3L1-205ENST00000409588 TRAV20A0A0B4J274 112 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 PHF1O43189 567 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 DIRAS1O95057 198 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 SCG5P05408 212 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 MSMBP08118 114 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 GAAP10253 952 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 RAC2P15153 192 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 CPT2P23786 658 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 RRM2P31350 389 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 GSSP48637 474 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 FXYD6P3P58550 94 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 PSG7Q13046 419 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 GK3PQ14409 553 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 TSTQ16762 297 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 SLC27A4Q6P1M0 643 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 USP51Q70EK9 711 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 ZBTB46Q86UZ6 589 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 ZDHHC21Q8IVQ6 265 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 RFLNBQ8N5W9 214 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 SAMD8Q96LT4 415 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 CCT8L2Q96SF2 557 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 HDHD2Q9H0R4 259 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 RERGLQ9H628 205 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 MAGIXQ9H6Y5 334 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 ASH2LQ9UBL3 628 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
NIF3L1-205ENST00000409588 B2RBV5 119 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 SPRY3O43610 288 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 TIMM8AO60220 97 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 CDC14BO60729 498 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 GATA3P23771 443 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 SRP14P37108 136 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 MPV17P39210 176 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 CCNIQ14094 377 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 PTCHD4Q6ZW05 846 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 RFPL4BQ6ZWI9 263 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 FANK1Q8TC84 345 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 CCL17Q92583 94 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 GPA33Q99795 319 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 COQ7Q99807 217 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 IFT27Q9BW83 186 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 CDADC1Q9BWV3 514 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms