RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CFAP77Q6ZQR2 320 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 CDH24Q86UP0 819 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 TRUB1Q8WWH5 349 aaKnown RBP16.59■□□□□ 0.25
HOXA9-202ENST00000396345 TEAD3Q99594 435 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 PITX2Q99697 317 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 HDHD2Q9H0R4 259 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 CA10Q9NS85 328 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 FAIMQ9NVQ4 179 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 FAM118AQ9NWS6 357 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 PLEKHA6Q9Y2H5 1048 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 PDZD2O15018 2839 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 DSCAMO60469 2012 aa16.58■□□□□ 0.25
HOXA9-202ENST00000396345 LOC100130705A0A1B0GUX0 176 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 CCDC182A6NF36 153 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 DLGAP1O14490 977 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 PSKH1P11801 424 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 APOBEC3AP31941 199 aaPredicted RBP16.58■□□□□ 0.24
HOXA9-202ENST00000396345 THBS4P35443 961 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 NKX6-1P78426 367 aaPredicted RBP16.58■□□□□ 0.24
HOXA9-202ENST00000396345 KEAP1Q14145 624 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 MEPCEQ7L2J0 689 aaKnown RBP16.58■□□□□ 0.24
HOXA9-202ENST00000396345 DCXRQ7Z4W1 244 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 GID4Q8IVV7 300 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 TIGD4Q8IY51 512 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 FBXL14Q8N1E6 418 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF555Q8NEP9 628 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 OR6N2Q8NGY6 317 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 MAP6Q96JE9 813 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 COQ7Q99807 217 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 EIF3KQ9UBQ5 218 aaKnown RBP16.58■□□□□ 0.24
HOXA9-202ENST00000396345 ATPIF1Q9UII2 106 aa16.58■□□□□ 0.24
HOXA9-202ENST00000396345 VSTM5A8MXK1 200 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 RRP9O43818 475 aaKnown RBP16.57■□□□□ 0.24
HOXA9-202ENST00000396345 SELENOFO60613 162 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 ATE1O95260 518 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 DANCRP0C864 163 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 FAM157BP0CG42 384 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 DNASE1P24855 282 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 PCSK6P29122 969 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 TTKP33981 857 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 ECH1Q13011 328 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 SHFQ7M4L6 423 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 DPY19L4Q7Z388 723 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 SLC7A6Q92536 515 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 UBE2FQ969M7 185 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 CCL19Q99731 98 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 VCXQ9H320 206 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 OR51B6Q9H340 312 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 LAMP3Q9UQV4 416 aa16.57■□□□□ 0.24
HOXA9-202ENST00000396345 SLC22A31A6NKX4 558 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 SLC16A6O15403 523 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 SOD3P08294 240 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 CD53P19397 219 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 GLRXP35754 106 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 WNT5AP41221 380 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 NAA10P41227 235 aaPredicted RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 RAD52P43351 418 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 UCP2P55851 309 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 RPS23P62266 143 aaKnown RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 SNRPGP62308 76 aaKnown RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 EIF2B1Q14232 305 aaKnown RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 AGAP6Q5VW22 663 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 ARL9Q6T311 187 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 MUC15Q8N387 334 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 NINJ1Q92982 152 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 C4orf45Q96LM5 186 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF582Q96NG8 517 aaPredicted RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 ATF6BQ99941 703 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 BCL2L14Q9BZR8 327 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 PNRC2Q9NPJ4 139 aaKnown RBP16.56■□□□□ 0.24
HOXA9-202ENST00000396345 DNAJC27Q9NZQ0 273 aa16.56■□□□□ 0.24
HOXA9-202ENST00000396345 GPRIN2O60269 458 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 LCKP06239 509 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 DBHP09172 617 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 OR4A8P0C604 315 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 SERPINF1P36955 418 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 RIPK1Q13546 671 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 ADIPOQQ15848 244 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 SLC16A9Q7RTY1 509 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 DTX2Q86UW9 622 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 OR10S1Q8NGN2 331 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 ST7LQ8TDW4 575 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 TMEM171Q8WVE6 324 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 NRG4Q8WWG1 115 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 CYGBQ8WWM9 190 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 PIGTQ969N2 578 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 SLAMF6Q96DU3 332 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 DCLRE1CQ96SD1 692 aaKnown RBP16.55■□□□□ 0.24
HOXA9-202ENST00000396345 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 WARS2Q9UGM6 360 aaKnown RBP16.55■□□□□ 0.24
HOXA9-202ENST00000396345 GRIP1Q9Y3R0 1128 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 CMAHPQ9Y471 501 aa16.55■□□□□ 0.24
HOXA9-202ENST00000396345 SMPD2O60906 423 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 ABHD16AO95870 558 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 MRPL3P09001 348 aaKnown RBP16.54■□□□□ 0.24
HOXA9-202ENST00000396345 HTR1FP30939 366 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 GGTLC2Q14390 218 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 SLC25A30Q5SVS4 291 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 TTC23Q5W5X9 447 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms