RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 DCAF12L2Q5VW00 463 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 C19orf48Q6RUI8 117 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 BHLHA9Q7RTU4 235 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ASB17Q8WXJ9 295 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SGCZQ96LD1 299 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SEC11CQ9BY50 192 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ENY2Q9NPA8 101 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MOKQ9UQ07 419 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 TMEM212A6NML5 194 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 EDN3P14138 238 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 NID1P14543 1247 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ATP1B3P54709 279 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SNRPNP63162 240 aaKnown RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SLC36A2Q495M3 483 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 PFN4Q8NHR9 129 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SECTM1Q8WVN6 248 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 RASD2Q96D21 266 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SDF2Q99470 211 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 OCSTAMPQ9BR26 566 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MMP26Q9NRE1 261 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 A0A087WV62 115 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ARRDC5A6NEK1 342 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 GABRR1P24046 479 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 AVPR2P30518 371 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MRPS21P82921 87 aaKnown RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF77Q15935 545 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MEX3BQ6ZN04 569 aaKnown RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF836Q6ZNA1 936 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SLC2A12Q8TD20 617 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 TCTN2Q96GX1 697 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MRPL22Q9NWU5 206 aaKnown RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 LUZP4Q9P127 313 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 CD207Q9UJ71 328 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 DAPP1Q9UN19 280 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 KCNK7Q9Y2U2 307 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ZNFX1Q9P2E3 1918 aaKnown RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 IFITM5A6NNB3 132 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 HCRTR1O43613 425 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 GALR3O60755 368 aaPredicted RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 PAPLNO95428 1278 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 CHRM4P08173 479 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 ADRA2AP08913 450 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 PSMB6P28072 239 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 SELENOVP59797 346 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 DCAF7P61962 342 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 CDKN3Q16667 212 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 MEP1BQ16820 701 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 COL13A1Q5TAT6 717 aaPredicted RBP14.64□□□□□ -0.07
NPHP3-201ENST00000337331 IL21Q9HBE4 155 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 TBC1D29Q9UFV1 150 aa14.64□□□□□ -0.07
NPHP3-201ENST00000337331 GPR37O15354 613 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 P2RX6O15547 441 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 LILRB5O75023 590 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 BPNT1O95861 308 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 NDUFB7P17568 137 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 GUCA2AQ02747 115 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 KLF9Q13886 244 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 TGIF1Q15583 401 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SLC16A9Q7RTY1 509 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 TMPRSS13Q9BYE2 586 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 KIR3DX1Q9H7L2 352 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 DUSP22Q9NRW4 184 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SLC23A2Q9UGH3 650 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 MBTPS2O43462 519 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 LAMTOR5O43504 91 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 DDTP30046 118 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 RPP30P78346 268 aaKnown RBP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 VN1R2Q8NFZ6 395 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 OR1J1Q8NGS3 322 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 TAAR8Q969N4 342 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF775Q96BV0 537 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SLC35A4Q96G79 324 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SLC25A21Q9BQT8 299 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 GVINP1Q7Z2Y8 2422 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 LRP3O75074 770 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 DPY19L2P2Q6ZN68 376 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 C17orf47Q8NEP4 570 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SLC41A2Q96JW4 573 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 NRSN2Q9GZP1 204 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 FAM212BQ9NTI7 297 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-201ENST00000337331 IL17BQ9UHF5 180 aa14.63□□□□□ -0.07
NPHP3-201ENST00000337331 SHISA3A0PJX4 238 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CYB5BO43169 146 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CLN5O75503 358 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 SERPINA2P20848 420 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 B4GALNT1Q00973 533 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 AWAT1Q58HT5 328 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF620Q6ZNG0 422 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 NICN1Q9BSH3 213 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 PTRH2Q9Y3E5 179 aaKnown RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 PCDHGA5Q9Y5G8 931 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 H0Y8X5 98 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 BRINP1O60477 761 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CTNSO60931 367 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 IGHG1P01857 330 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 RAB4AP20338 218 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms