RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NPR2P20594 1047 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 TNFSF8P32971 234 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MMP16P51512 607 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MRPS34P82930 218 aaKnown RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 SFXN4Q6P4A7 337 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MINDY2Q8NBR6 621 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 CPT1CQ8TCG5 803 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 ACOT12Q8WYK0 555 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 WDYHV1Q96HA8 205 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SLC30A2Q9BRI3 323 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 BCO1Q9HAY6 547 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 CRLF2Q9HC73 371 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SLC22A13Q9Y226 551 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 PIEZO1Q92508 2521 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MRPL33O75394 65 aaKnown RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 RAF1P04049 648 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 C3AR1Q16581 482 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 ODF4Q2M2E3 257 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MZT2AQ6P582 158 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SPACA3Q8IXA5 215 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 PARP16Q8N5Y8 322 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 KCTD12Q96CX2 325 aaKnown RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 ALKBH3Q96Q83 286 aaPredicted RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 ABCB9Q9NP78 766 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 PARPBPQ9NWS1 579 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 OR52A1Q9UKL2 312 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SPENQ96T58 3664 aaKnown RBP16.01■□□□□ 0.15
VIM-201ENST00000224237 ZNF724A8MTY0 619 aa16■□□□□ 0.15
VIM-201ENST00000224237 RER1O15258 196 aa16■□□□□ 0.15
VIM-201ENST00000224237 PIN1P1O15428 100 aa16■□□□□ 0.15
VIM-201ENST00000224237 HSD11B1P28845 292 aa16■□□□□ 0.15
VIM-201ENST00000224237 EIF2S3P41091 472 aaKnown RBP16■□□□□ 0.15
VIM-201ENST00000224237 OR10A3P58181 314 aa16■□□□□ 0.15
VIM-201ENST00000224237 PPP3R1P63098 170 aa16■□□□□ 0.15
VIM-201ENST00000224237 ZNF169Q14929 603 aaPredicted RBP16■□□□□ 0.15
VIM-201ENST00000224237 RDH10Q8IZV5 341 aa16■□□□□ 0.15
VIM-201ENST00000224237 GJC3Q8NFK1 279 aa16■□□□□ 0.15
VIM-201ENST00000224237 PNRC2Q9NPJ4 139 aaKnown RBP16■□□□□ 0.15
VIM-201ENST00000224237 G6PC2Q9NQR9 355 aa16■□□□□ 0.15
VIM-201ENST00000224237 PHF3Q92576 2039 aaKnown RBP16■□□□□ 0.15
VIM-201ENST00000224237 A0A0G2JK05 382 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 PDCD5O14737 125 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 SOX2P48431 317 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 ENDOGQ14249 297 aaKnown RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 OXA1LQ15070 435 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 IDNKQ5T6J7 187 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 FAM27BQ5VT28 67 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 ZNF704Q6ZNC4 412 aaPredicted RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 OR51A4Q8NGJ6 313 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TSEN15Q8WW01 171 aaKnown RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 TMEM106AQ96A25 262 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 ZNF837Q96EG3 531 aaPredicted RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 SLITRK2Q9H156 845 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 SLCO5A1Q9H2Y9 848 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 MOB1AQ9H8S9 216 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 COMMD3Q9UBI1 195 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 CAMK2AQ9UQM7 478 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 IGF2RP11717 2491 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 OR6C65A6NJZ3 312 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 NOTOA8MTQ0 251 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 PDGFAP04085 211 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 ISG15P05161 165 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 UBCP0CG48 685 aaKnown RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 MAGEB1P43366 347 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 PSMA6P60900 246 aaKnown RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 GRB2P62993 217 aaKnown RBP15.99■□□□□ 0.15
VIM-201ENST00000224237 TAF13Q15543 124 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TRIM16LQ309B1 348 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 BCL2L15Q5TBC7 163 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 MCEMP1Q8IX19 187 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 OR10AC1Q8NH08 325 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 LINC00470Q9BZP3 86 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 MIXL1Q9H2W2 232 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TCF7L1Q9HCS4 588 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TMEM38BQ9NVV0 291 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 FAM206AQ9NX38 181 aa15.99■□□□□ 0.15
VIM-201ENST00000224237 TRBV5-7A0A0A0MS05 114 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 ISPDA4D126 451 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 K7EM74 188 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 WISP2O76076 250 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 IFITM3Q01628 133 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 CEP78Q5JTW2 689 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 LRRC18Q8N456 261 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 DRAXINQ8NBI3 349 aaPredicted RBP15.98■□□□□ 0.15
VIM-201ENST00000224237 PRDM14Q9GZV8 571 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 ZCCHC4Q9H5U6 513 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 DDX28Q9NUL7 540 aaKnown RBP15.98■□□□□ 0.15
VIM-201ENST00000224237 DAPK2Q9UIK4 370 aa15.98■□□□□ 0.15
VIM-201ENST00000224237 A0A1B0GVC2 190 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 KRT33AO76009 404 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 YES1P07947 543 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 ACHEP22303 614 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 CEACAM16Q2WEN9 425 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 TMEM244Q5VVB8 128 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 LINGO2Q7L985 606 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 SYT9Q86SS6 491 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 PPP1R14AQ96A00 147 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms