RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HSD17B8Q92506 261 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 MNTQ99583 582 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 CDADC1Q9BWV3 514 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 CNOT2Q9NZN8 540 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PSORS1C1Q9UIG5 152 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC25A15Q9Y619 301 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PRR14LQ5THK1 2151 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 IRGMA1A4Y4 181 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 J3QRE1 110 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 FAM20BO75063 409 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 PIPP12273 146 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF32P17041 273 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 HIST1H3AP68431 136 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 SCRN3Q0VDG4 424 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 TAB1Q15750 504 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 HIST2H3PS2Q5TEC6 136 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 HIST2H3AQ71DI3 136 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF786Q8N393 782 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 OR4F15Q8NGB8 312 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC24A3Q9HC58 644 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 MOV10Q9HCE1 1003 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 CCNB1IP1Q9NPC3 277 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 PCDHGB1Q9Y5G3 927 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 TIMM10BQ9Y5J6 103 aa17.3■□□□□ 0.36
PDLIM2-221ENST00000622702 EFCAB10A6NFE3 127 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 TUBAL3A6NHL2 446 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 APOL3O95236 402 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 FADS2O95864 444 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 WNT11O96014 354 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 PATE4P0C8F1 98 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 ARR3P36575 388 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 RPS27P42677 84 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 CAPZA2P47755 286 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 TUBA1BP68363 451 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 TUBA4AP68366 448 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 GSG1Q2KHT4 349 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 RBM48Q5RL73 367 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 CORO6Q6QEF8 472 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 TUBA1AQ71U36 451 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 LINC00346Q8IVM7 164 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC35F2Q8IXU6 374 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 FAM169BQ8N8A8 192 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 GJC3Q8NFK1 279 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 OR2AJ1Q8NGZ0 328 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 OR52N5Q8NH56 324 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 LINC01560Q8TB33 94 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 GGHQ92820 318 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 MUCL1Q96DR8 90 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 NOX3Q9HBY0 568 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 FGF20Q9NP95 211 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 SCN3BQ9NY72 215 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 CRIM1Q9NZV1 1036 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 GDF2Q9UK05 429 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 TMEM14AQ9Y6G1 99 aa17.29■□□□□ 0.36
PDLIM2-221ENST00000622702 OR2T7P0C7T2 308 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 CD79AP11912 226 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 ALOX5APP20292 161 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 CRHBPP24387 322 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 RAB1AP62820 205 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 ACTC1P68032 377 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 ACTA1P68133 377 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 C22orf34Q6ZV56 151 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF295-AS1Q8N0V1 137 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 OR52I1Q8NGK6 324 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 OR2T27Q8NH04 317 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 ST7LQ8TDW4 575 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 SMAP2Q8WU79 429 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 MAP6Q96JE9 813 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 RHNO1Q9BSD3 238 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 YTHDF1Q9BYJ9 559 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 OR2H1Q9GZK4 316 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 C1orf198Q9H425 327 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 RNF121Q9H920 327 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 KCNN3Q9UGI6 736 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 TPRKBQ9Y3C4 175 aa17.28■□□□□ 0.36
PDLIM2-221ENST00000622702 A0A1W2PR80 420 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 RER1O15258 196 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 IGHA1P01876 353 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 PRF1P14222 555 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 CBR1P16152 277 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC35A2P78381 396 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 PSG4Q00888 419 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 PIGFQ07326 219 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 PPA1Q15181 289 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 CFAP77Q6ZQR2 320 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 DCXRQ7Z4W1 244 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 MDP1Q86V88 176 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF540Q8NDQ6 660 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF75AQ96N20 296 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 WFIKKN1Q96NZ8 548 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 ABHD6Q9BV23 337 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 JAM3Q9BX67 310 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 DUSP21Q9H596 190 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 CRNNQ9UBG3 495 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 NDRG3Q9UGV2 375 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 LAMP5Q9UJQ1 280 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 BLOC1S6Q9UL45 172 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 MYRFQ9Y2G1 1151 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms