RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 B4E171 279 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 TSPAN7P41732 249 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 POU3F4P49335 361 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 TAS2R20P59543 309 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 DEGS2Q6QHC5 323 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 TCTE3Q8IZS6 198 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 PAQR8Q8TEZ7 354 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 OXGR1Q96P68 337 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 KCNK15Q9H427 330 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 PAQR5Q9NXK6 330 aaPredicted RBP12.13□□□□□ -0.47
NEK3-205ENST00000610828 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 A0A087WZY1 265 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 ECDO95905 644 aaPredicted RBP12.13□□□□□ -0.47
NEK3-205ENST00000610828 YES1P07947 543 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 CSRP1P21291 193 aaKnown RBP12.13□□□□□ -0.47
NEK3-205ENST00000610828 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
NEK3-205ENST00000610828 OTX2P32243 289 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 DNASE1L1P49184 302 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 EFNB2P52799 333 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 SCAND1P57086 179 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 MFAP5Q13361 173 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 RAB11BQ15907 218 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 TMEM81Q6P7N7 255 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 TMPPEQ6ZT21 453 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 SLC7A5P1Q8MH63 180 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 GTPBP8Q8N3Z3 284 aaPredicted RBP12.13□□□□□ -0.47
NEK3-205ENST00000610828 OR1J4Q8NGS1 313 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 EMC7Q9NPA0 242 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 PADI1Q9ULC6 663 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 SDK2Q58EX2 2172 aa12.13□□□□□ -0.47
NEK3-205ENST00000610828 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 AQP7P3A6NL99 342 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 SLC17A2O00624 439 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 ISG15P05161 165 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 LIFP15018 202 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 TCN2P20062 427 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 CDAP32320 146 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 MLF1P58340 268 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 AP3S2P59780 193 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 SLC35A1P78382 337 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
NEK3-205ENST00000610828 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
NEK3-205ENST00000610828 TIGD3Q6B0B8 471 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 SFRP4Q6FHJ7 346 aaPredicted RBP12.12□□□□□ -0.47
NEK3-205ENST00000610828 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
NEK3-205ENST00000610828 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 RNF170Q96K19 258 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 HRASLSQ9HDD0 168 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 DKKL1Q9UK85 242 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 PMS2P1A4D2B8 440 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 M0R296 226 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 ACOT7O00154 380 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 P2RY10O00398 339 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 XRCC3O43542 346 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 GMDSO60547 372 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 ACHEP22303 614 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 DSCR4P56555 118 aaPredicted RBP12.12□□□□□ -0.47
NEK3-205ENST00000610828 BCL2A1Q16548 175 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 GLT8D1Q68CQ7 371 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 HDDC2Q7Z4H3 204 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 C15orf40Q8WUR7 153 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 SCMH1Q96GD3 660 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 MED28Q9H204 178 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 NKIRAS2Q9NYR9 191 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 PISDQ9UG56 409 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 TCFL5Q9UL49 500 aa12.12□□□□□ -0.47
NEK3-205ENST00000610828 LNP1A1A4G5 178 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 LMX1BO60663 402 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 GLSO94925 669 aaPredicted RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 SP9P0CG40 484 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 UBCP0CG48 685 aaKnown RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 FSTP19883 344 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CFPP27918 469 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 MMP16P51512 607 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CLDN6P56747 220 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 GPR85P60893 370 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 TOMM20Q15388 145 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 TMEM255AQ5JRV8 349 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 TMEM244Q5VVB8 128 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 ANKRD16Q6P6B7 361 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms