RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TEX29Q8N6K0 151 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 SCAIQ8N9R8 606 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 OR4M2Q8NGB6 313 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 OR4C15Q8NGM1 316 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 OR6N1Q8NGY5 312 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 OR5J2Q8NH18 312 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 NANPQ8TBE9 248 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 GNPDA2Q8TDQ7 276 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 GIPC3Q8TF64 312 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 LRTOMTQ8WZ04 291 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 DVL3Q92997 716 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 FAM46AQ96IP4 442 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 B3GAT2Q9NPZ5 323 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 WIPI2Q9Y4P8 454 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 PPIAL4AQ9Y536 164 aa13.99□□□□□ -0.17
SHKBP1-215ENST00000597649 ZNF726A6NNF4 738 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 BLOC1S5-TXNDC5H3BN57 136 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 J3QLI3 93 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 PLPP3O14495 311 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 UBL3O95164 117 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 BAG2O95816 211 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 HKR1P10072 659 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 MAKP20794 623 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 AHCYP23526 432 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 GPR4P46093 362 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 DEFA6Q01524 100 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 PUDPQ08623 228 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 TUSC1Q2TAM9 212 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 DCAF12L2Q5VW00 463 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 RGS7BPQ6MZT1 257 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 LRFN4Q6PJG9 635 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 SHISA2Q6UWI4 295 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 AMIGO2Q86SJ2 522 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 BPIFB2Q8N4F0 458 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 FUZQ9BT04 418 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 OR51B6Q9H340 312 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 C7orf69Q9H7B7 122 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 VNN3Q9NY84 501 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 MRPL39Q9NYK5 338 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 NKIRAS2Q9NYR9 191 aa13.98□□□□□ -0.17
SHKBP1-215ENST00000597649 IGHV1-69-2A0A0G2JMI3 117 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 ADORA3P0DMS8 318 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 SLC9A3P48764 834 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 ZP4Q12836 540 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 TMEM154Q6P9G4 183 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 TMPRSS11FQ6ZWK6 438 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 PXKQ7Z7A4 578 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 OAFQ86UD1 273 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 SLC22A24Q8N4F4 322 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 SLC30A7Q8NEW0 376 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 OR10G2Q8NGC3 310 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 OR51A7Q8NH64 312 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 OR5K1Q8NHB7 308 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 SYNPRQ8TBG9 265 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 TMEM54Q969K7 222 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 CENPNQ96H22 339 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 NDEL1Q9GZM8 345 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 SEMA6AQ9H2E6 1030 aa13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 PDP1Q9P0J1 537 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-215ENST00000597649 UNC119BA6NIH7 251 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 C11orf98E9PRG8 122 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 H3BNX3 289 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 RNF13O43567 381 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 SERPINI2O75830 405 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 OMPP47874 163 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 CSNK1A1P48729 337 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 BIDP55957 195 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 KLF3P57682 345 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 FOXL1Q12952 345 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 HNRNPA0Q13151 305 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 TSTQ16762 297 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 PCGF3Q3KNV8 242 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 USP51Q70EK9 711 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 ZER1Q7Z7L7 766 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 SIGLECL1Q8N7X8 197 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 AQP11Q8NBQ7 271 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 ICA1LQ8NDH6 482 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 OR9Q2Q8NGE9 314 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 LIPHQ8WWY8 451 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 RAB39BQ96DA2 213 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 NRBF2Q96F24 287 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 C1orf147Q96MC9 270 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 DUX5Q96PT3 197 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 PKP2Q99959 881 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 DDX28Q9NUL7 540 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 GLTPQ9NZD2 209 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 FBXL3Q9UKT7 428 aa13.96□□□□□ -0.17
SHKBP1-215ENST00000597649 G3V2T6 193 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 GASTP01350 101 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 RAD52P43351 418 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 UCP2P55851 309 aa13.95□□□□□ -0.18
SHKBP1-215ENST00000597649 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms