RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CLDND2Q8NHS1 167 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 TMEM186Q96B77 213 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 ERMAPQ96PL5 475 aaPredicted RBP15.02■□□□□ -0
SHKBP1-203ENST00000594298 SH3GL3Q99963 347 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 IFT27Q9BW83 186 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 LRMDAQ9H2I8 198 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 C1orf198Q9H425 327 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 CCNB1IP1Q9NPC3 277 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 IL20RAQ9UHF4 553 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 U3KQV3 271 aa15.02■□□□□ -0
SHKBP1-203ENST00000594298 ARPC3O15145 178 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 GASTP01350 101 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 MSMBP08118 114 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 COL8A2P25067 703 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 NOS3P29474 1203 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 ALDH3B1P43353 468 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 FXYD6P3P58550 94 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 MESTQ5EB52 335 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 FAM27BQ5VT28 67 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF770Q6IQ21 691 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 RASSF6Q6ZTQ3 369 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 LRP11Q86VZ4 500 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 SEMA6DQ8NFY4 1073 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 OR9Q2Q8NGE9 314 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 GIPC3Q8TF64 312 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 SAMD8Q96LT4 415 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 WACQ9BTA9 647 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 METTL17Q9H7H0 456 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 HIF1ANQ9NWT6 349 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 MYEF2Q9P2K5 600 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 UGT2A1Q9Y4X1 527 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 CDH10Q9Y6N8 788 aa15.01□□□□□ -0.01
SHKBP1-203ENST00000594298 IQCMA0A1B0GVH7 501 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 A0A1W2PPL8 197 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 FAM157AC9JC47 383 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 EBAG9O00559 213 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 KHDRBS3O75525 346 aaKnown RBP15□□□□□ -0.01
SHKBP1-203ENST00000594298 CIB2O75838 187 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 VENTXO95231 258 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 PPP1R3DO95685 299 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 SERPINA5P05154 406 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 CDAP32320 146 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 ARHGDIAP52565 204 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 PCBD1P61457 104 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 CBX1P83916 185 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 COX10Q12887 443 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 PPP1R8Q12972 351 aaKnown RBP15□□□□□ -0.01
SHKBP1-203ENST00000594298 SCGB2A2Q13296 93 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 DNM1P34Q6PK57 102 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 C12orf54Q6X4T0 127 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF620Q6ZNG0 422 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 JAZF1Q86VZ6 243 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF584Q8IVC4 421 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 LRRC18Q8N456 261 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 AQP11Q8NBQ7 271 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 PAPD5Q8NDF8 572 aaKnown RBP15□□□□□ -0.01
SHKBP1-203ENST00000594298 OR1J2Q8NGS2 313 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 YIPF5Q969M3 257 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 RASD2Q96D21 266 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF416Q9BWM5 594 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 DGCR6LQ9BY27 220 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 OCEL1Q9H607 264 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF275Q9NSD4 429 aaPredicted RBP15□□□□□ -0.01
SHKBP1-203ENST00000594298 VSX1Q9NZR4 365 aaPredicted RBP15□□□□□ -0.01
SHKBP1-203ENST00000594298 DNAJB9Q9UBS3 223 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 GRIP1Q9Y3R0 1128 aa15□□□□□ -0.01
SHKBP1-203ENST00000594298 IGKV1D-43A0A0B4J1Z2 117 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 ARRDC5A6NEK1 342 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 H7C1C5 153 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 SOCS2O14508 198 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 FKBP6O75344 327 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 E2F6O75461 281 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 RP2O75695 350 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 RENP00797 406 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 CST2P09228 141 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 PATE4P0C8F1 98 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 GAAP10253 952 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 MSR1P21757 451 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 CRABP1P29762 137 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 LCN6P62502 163 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 HSF2Q03933 536 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 RAB39AQ14964 217 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 MAD2L1BPQ15013 274 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 C1orf146Q5VVC0 180 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 FOXL2NBQ6ZUU3 175 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 ALDH16A1Q8IZ83 802 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 CLDN22Q8N7P3 220 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 OR10G2Q8NGC3 310 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 OR51F2Q8NH61 342 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 FGFBP3Q8TAT2 258 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 VNN3Q9NY84 501 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 IL20Q9NYY1 176 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 DUSP13Q9UII6 198 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 FZR1Q9UM11 496 aa14.99□□□□□ -0.01
SHKBP1-203ENST00000594298 A0A1W2PPW3 197 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 C12orf71A8MTZ7 269 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 WNT9BO14905 357 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 SLC16A7O60669 478 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 NCR1O76036 304 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms