RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ROR2Q01974 943 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 SLC3A1Q07837 685 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 ENDOGQ14249 297 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 CEACAM16Q2WEN9 425 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 ACSF3Q4G176 576 aaPredicted RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 CFAP77Q6ZQR2 320 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 SPATC1Q76KD6 591 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 OR10S1Q8NGN2 331 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 OR2AJ1Q8NGZ0 328 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 GHSRQ92847 366 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 DCLRE1CQ96SD1 692 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 TXNL4BQ9NX01 149 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 TRBV2A0A0J9YWF9 115 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 TMEM8BA6NDV4 472 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 RPL36A-HNRNPH2H7BZ11 118 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 ZNF254O75437 659 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 NPR2P20594 1047 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
PNKP-203ENST00000593946 UGT2B10P36537 528 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 OPRL1P41146 370 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 RIDAP52758 137 aaKnown RBP18.31■□□□□ 0.52
PNKP-203ENST00000593946 GUSBP1Q15486 140 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 TRAM1Q15629 374 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 STK11Q15831 433 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 FAM27BQ5VT28 67 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 FDX2Q6P4F2 183 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 USP43Q70EL4 1123 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 WNT2BQ93097 391 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 SLAMF6Q96DU3 332 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 DCSTAMPQ9H295 470 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 SIAEQ9HAT2 523 aa18.31■□□□□ 0.52
PNKP-203ENST00000593946 ZGRF1Q86YA3 2104 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 KRT33AO76009 404 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 IGHV3-9P01782 118 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 TDGF1P3P51864 188 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 ALKBH1Q13686 389 aaKnown RBP18.3■□□□□ 0.52
PNKP-203ENST00000593946 OR7E24Q6IFN5 339 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 TMEM91Q6ZNR0 172 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 RHOUQ7L0Q8 258 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 KBTBD8Q8NFY9 601 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 DYNC2LI1Q8TCX1 351 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 FOXB1Q99853 325 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 HDHD5Q9BXW7 423 aa18.3■□□□□ 0.52
PNKP-203ENST00000593946 INTS1Q8N201 2190 aaKnown RBP18.3■□□□□ 0.52
PNKP-203ENST00000593946 GABRPO00591 440 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 RGS9O75916 674 aaPredicted RBP18.29■□□□□ 0.52
PNKP-203ENST00000593946 NSUN5P2Q63ZY6 315 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 ZNF100Q8IYN0 542 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 CISD2Q8N5K1 135 aaKnown RBP18.29■□□□□ 0.52
PNKP-203ENST00000593946 MS4A15Q8N5U1 240 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 OR2G2Q8NGZ5 317 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 PDCD1LG2Q9BQ51 273 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 FRRS1LQ9P0K9 344 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 CD8B2A6NJW9 211 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 RER1O15258 196 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 GPRIN2O60269 458 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 SC5DO75845 299 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 TUBA1BP68363 451 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 INSL4Q14641 139 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 C22orf42Q6IC83 251 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 ZNF585AQ6P3V2 769 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 TUBA1AQ71U36 451 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 LRRC18Q8N456 261 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 PRORYQ9H606 182 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 PNRC2Q9NPJ4 139 aaKnown RBP18.29■□□□□ 0.52
PNKP-203ENST00000593946 CENPMQ9NSP4 180 aa18.29■□□□□ 0.52
PNKP-203ENST00000593946 ZNF878C9JN71 531 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 ZNF587BE7ETH6 402 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 SRSF10O75494 262 aaKnown RBP18.28■□□□□ 0.52
PNKP-203ENST00000593946 ZFPL1O95159 310 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 H2BFMP0C1H6 154 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 HIST1H3AP68431 136 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 SF3B4Q15427 424 aaKnown RBP eCLIP18.28■□□□□ 0.524e-8■■■■□ 20.8
PNKP-203ENST00000593946 NRN1LQ496H8 165 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 HIST2H3PS2Q5TEC6 136 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 HIST2H3AQ71DI3 136 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 PRSS35Q8N3Z0 413 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 C9orf106Q8NAJ2 232 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 KDF1Q8NAX2 398 aaPredicted RBP18.28■□□□□ 0.52
PNKP-203ENST00000593946 C4orf45Q96LM5 186 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 TSC22D3Q99576 134 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 FBXL3Q9UKT7 428 aa18.28■□□□□ 0.52
PNKP-203ENST00000593946 OR4C45A6NMZ5 311 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 CST2P09228 141 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 CD8BP10966 210 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 GABRA1P14867 456 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 B4GALT1P15291 398 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 DCTDP32321 178 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 OR3A2P47893 321 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 SERPINB10P48595 397 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 RPS11P62280 158 aaKnown RBP eCLIP18.27■□□□□ 0.52
PNKP-203ENST00000593946 FAM214BQ7L5A3 538 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 ZNF627Q7L945 461 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 GCNT2Q8N0V5 402 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 SLC22A24Q8N4F4 322 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 GJC3Q8NFK1 279 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 ABHD4Q8TB40 342 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 FBXO17Q96EF6 278 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 KCTD7Q96MP8 289 aa18.27■□□□□ 0.52
PNKP-203ENST00000593946 SLX1AQ9BQ83 275 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms