RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 GALNT16Q8N428 558 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 RSC1A1Q92681 617 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ZNF764Q96H86 408 aaPredicted RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 ADAT1Q9BUB4 502 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SCPEP1Q9HB40 452 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 PLEKHJ1Q9NW61 149 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 RAB22AQ9UL26 194 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 OIP5O43482 229 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 HCRTR1O43613 425 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SEMA4FO95754 770 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 IFNA17P01571 189 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 CXCL10P02778 98 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 GNRHRP30968 328 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 NANOS3P60323 173 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 ETFDHQ16134 617 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 HSD17B11Q8NBQ5 300 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SLC37A2Q8TED4 501 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 CMBLQ96DG6 245 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SLC5A7Q9GZV3 580 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 MRPS28Q9Y2Q9 187 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 RNF215Q9Y6U7 377 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 TRAV36DV7A0A075B6V5 113 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 PLSCR5A0PG75 271 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 FAM74A7A6NL05 159 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SEC14L5O43304 696 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 TNFSF12O43508 249 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 AKR7A3O95154 331 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 VSIG10L2P0DP72 767 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ST6GAL1P15907 406 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 GNB3P16520 340 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ALOX5APP20292 161 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ZP1P60852 638 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 HSD11B2P80365 405 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SRSF5Q13243 272 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 SLC17A1Q14916 467 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 EEF1A1P5Q5VTE0 462 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 CA13Q8N1Q1 262 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SLC22A24Q8N4F4 322 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 OR51A4Q8NGJ6 313 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 COX14Q96I36 57 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 LPAR4Q99677 370 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 NPAS1Q99742 590 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 EMC6Q9BV81 110 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 OR11A1Q9GZK7 315 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 CEP290O15078 2479 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 IGKV1-8A0A0C4DH67 115 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 TRIM77I1YAP6 450 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 ARPC3O15145 178 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 HSPA12AO43301 675 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 NSA2O95478 260 aaKnown RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 GLAP06280 429 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 HOXD4P09016 255 aaPredicted RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 CISD3P0C7P0 127 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 LYG2Q86SG7 212 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 SPPL3Q8TCT6 385 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 TAF9BQ9HBM6 251 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 FRRS1LQ9P0K9 344 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 PPP4R1LQ9P1A2 415 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 MRM2Q9UI43 246 aaKnown RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 ZNF230Q9UIE0 474 aaPredicted RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 WIF1Q9Y5W5 379 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 TMED7-TICAM2A0A0A6YYA0 188 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 A6NIZ1 184 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 SIGLEC6O43699 453 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 FBLP22087 321 aaKnown RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 THBS2P35442 1172 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 EFNB2P52799 333 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 RAP1BP61224 184 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 PPP2CBP62714 309 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 RAP1AP62834 184 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 PPP2CAP67775 309 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 STPG2Q8N412 459 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 OR6K3Q8NGY3 331 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 FAM174AQ8TBP5 190 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 ZPLD1Q8TCW7 415 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 ADAMTS18Q8TE60 1221 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 ASB16Q96NS5 453 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 MOGAT1Q96PD6 335 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 MAP3K3Q99759 626 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 SERTAD3Q9UJW9 196 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 TMED7Q9Y3B3 224 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 RPA2P15927 270 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 BLVRBP30043 206 aaPredicted RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 DAP3P51398 398 aaKnown RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 ADPRHP54922 357 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 PPA1Q15181 289 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 C19orf47Q8N9M1 422 aaKnown RBP9.54□□□□□ -0.88
USB1-212ENST00000566082 WDSUB1Q8N9V3 476 aa9.54□□□□□ -0.88
USB1-212ENST00000566082 SLC25A38Q96DW6 304 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms