RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MARVELD2Q8N4S9 558 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ARIH2OSQ8N7S6 290 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 POMGNT2Q8NAT1 580 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF519Q8TB69 540 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MAGEE2Q8TD90 523 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ASB5Q8WWX0 329 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 APH1AQ96BI3 265 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A44Q96H78 314 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SAMD8Q96LT4 415 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 OR2M2Q96R28 347 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 ALG12Q9BV10 488 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 KATNB1Q9BVA0 655 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 IFT27Q9BW83 186 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 POLDIP3Q9BY77 421 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MRPL13Q9BYD1 178 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 LINC00470Q9BZP3 86 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 EGLN3Q9H6Z9 239 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 PLSCR4Q9NRQ2 329 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 TBC1D23Q9NUY8 699 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SMPD3Q9NY59 655 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 MALT1Q9UDY8 824 aa5.05□□□□□ -1.6
SCAF11-213ENST00000550629 NOSIPQ9Y314 301 aaKnown RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 RP1L1Q8IWN7 2480 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-213ENST00000550629 SHANK1Q9Y566 2161 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 LINC01548A6NM66 108 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 E9PQ18 207 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 C11orf98E9PRG8 122 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 H0YAE9 185 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 LRRTM2O43300 516 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 MITFO75030 526 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 JTBO76095 146 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SOX14O95416 240 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CGAP01215 116 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 IFNGP01579 166 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 IGHG1P01857 330 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PGA4P0DJD7 388 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PGA3P0DJD8 388 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 HLA-DOBP13765 273 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ACADSP16219 412 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 POU1F1P28069 291 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 VHLP40337 213 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PTDSS1P48651 473 aaKnown RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF133P52736 654 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SH3BGRP55822 239 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 BIDP55957 195 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CLDN17P56750 224 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ERVK-25P63136 954 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CDK5Q00535 292 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 MYBPC1Q00872 1141 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ITGADQ13349 1161 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 IL18R1Q13478 541 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 KRR1Q13601 381 aaKnown RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 KEAP1Q14145 624 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 GINS1Q14691 196 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PTGES3Q15185 160 aaKnown RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SNCBQ16143 134 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 HIST3H3Q16695 136 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PGGHGQ32M88 737 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A35Q3KQZ1 300 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 FBXL19-AS1Q494R0 122 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CLEC12AQ5QGZ9 265 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A30Q5SVS4 291 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLX4IPQ5VYV7 408 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TTC23Q5W5X9 447 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 FBXW9Q5XUX1 488 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 LPCAT4Q643R3 524 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 XKRXQ6PP77 449 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 C3P1Q6ZMU1 363 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF782Q6ZMW2 699 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 Q6ZT83 130 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 AAED1Q7RTV5 226 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TUSC5Q8IXB3 177 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF100Q8IYN0 542 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 KDM8Q8N371 416 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CNEP1R1Q8N9A8 125 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SEMA6DQ8NFY4 1073 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 OR8D4Q8NGM9 314 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TRUB1Q8WWH5 349 aaKnown RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM54Q969K7 222 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF566Q969W8 418 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 STARD4Q96DR4 205 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 DNAJA3Q96EY1 480 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF570Q96NI8 536 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ERMAPQ96PL5 475 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF385AQ96PM9 386 aaKnown RBP5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLC38A2Q96QD8 506 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TSPAN32Q96QS1 320 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PITX2Q99697 317 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLC29A1Q99808 456 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 TSSK6Q9BXA6 273 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PLA2G12AQ9BZM1 189 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SLCO5A1Q9H2Y9 848 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 FN3KQ9H479 309 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 B3GAT2Q9NPZ5 323 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 CMC2Q9NRP2 79 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 COQ3Q9NZJ6 369 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ERRFI1Q9UJM3 462 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms