RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 PDGFAP04085 211 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ATF4P18848 351 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CXCL2P19875 107 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 NFYAP23511 347 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CXADRP78310 365 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 DMWDQ09019 674 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 C3P1Q6ZMU1 363 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ARMC10Q8N2F6 343 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 OR1N1Q8NGS0 311 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 HAVCR2Q8TDQ0 301 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC41A2Q96JW4 573 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CRB3Q9BUF7 120 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SELENOIQ9C0D9 397 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 TCRBV16S1A1N1A0A5B0 115 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ANKRD20A5PA0PJZ0 165 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SYT7O43581 403 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 BGLAPP02818 100 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 TPOP07202 933 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CELA2AP08217 269 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CALCBP10092 127 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC6A8P48029 635 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 GUSBP11Q6P575 273 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 KCTD20Q7Z5Y7 419 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 LRRC18Q8N456 261 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 OR10G3Q8NGC4 313 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 STK35Q8TDR2 534 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CXorf58Q96LI9 332 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 RBP7Q96R05 134 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 PELOQ9BRX2 385 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 DENND4AQ7Z401 1863 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 F5H5K5 113 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 TPD52L2O43399 206 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ABHD16AO95870 558 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 ABOP16442 354 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 GNB3P16520 340 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 H2BFSP57053 126 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 RBMS2Q15434 407 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 TMEM176BQ3YBM2 270 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 C3orf33Q6P1S2 294 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 GLDNQ6ZMI3 551 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 RNF144BQ7Z419 303 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 BPIFB2Q8N4F0 458 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 OR51E1Q8TCB6 317 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 OR52A1Q9UKL2 312 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
PRPF40B-209ENST00000548825 VSTM2BA6NLU5 285 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 SCRG1O75711 98 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 MPIG6BO95866 241 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 HCKP08631 526 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC25A1P53007 311 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 CLRN1P58418 232 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC38A6Q8IZM9 456 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 OR10K1Q8NGX5 313 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF736B4DX44 427 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 XRCC3O43542 346 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 IGKV3-11P04433 115 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 AKAIN1P0CW23 69 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 EMP2P54851 167 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 SGCBQ16585 318 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 NKAIN1Q4KMZ8 207 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 GRINAQ7Z429 371 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF584Q8IVC4 421 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 ASB5Q8WWX0 329 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 TXNIPQ9H3M7 391 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 HRH3Q9Y5N1 445 aa12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 PTPRZ1P23471 2315 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-209ENST00000548825 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 C5orf51A6NDU8 294 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 F5H5P2 479 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 PLPP3O14495 311 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF254O75437 659 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 HTR3BO95264 441 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 HLA-AP01891 365 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 IFNA6P05013 189 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 ACHEP22303 614 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 AKR1C2P52895 323 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 IGLV3-21P80748 117 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 MFAP5Q13361 173 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 IL10RAQ13651 578 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 AWAT2Q6E213 333 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms