RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 FN3KQ9H479 309 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SAP30LQ9HAJ7 183 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 C3orf14Q9HBI5 128 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 C20orf96Q9NUD7 363 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 ING3Q9NXR8 418 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MARCH4Q9P2E8 410 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 PITPNC1Q9UKF7 332 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 NDRG4Q9ULP0 352 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 FAF1Q9UNN5 650 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 SLC12A4Q9UP95 1085 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 R3HDM2Q9Y2K5 976 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 MAD1L1Q9Y6D9 718 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CEPT1Q9Y6K0 416 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MPDZO75970 2070 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SEC16AO15027 2179 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 IGHV4-4A0A075B6R2 117 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 hCG_1818297A0A087WSY0 165 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TRAV10A0A0B4J240 114 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TEX13CA0A0J9YWL9 993 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 A0A0J9YXV3 536 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SYCE3A1L190 88 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DPPA5A6NC42 116 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 LRCOL1A6NCL2 159 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GOLGA6CA6NDK9 693 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GOLGA6BA6NDN3 693 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 A8MTW9 85 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SEC14L6B5MCN3 397 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 LOC110117498-PIK3R3F6TDL0 507 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 H3BUX3 64 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 APOC4-APOC2K7ER74 178 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 LGALS8O00214 317 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 PSMD12O00232 456 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 CLGNO14967 610 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ERI3O43414 337 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 SH3BGRLO75368 114 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RHBDL1O75783 438 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TRAPPC6AO75865 159 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 NDUFB2O95178 105 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 HLA-DQA2P01906 255 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 APOC2P02655 101 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SNRNP70P08621 437 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 LGALS1P09382 135 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 ZSCAN5DPP0CG00 497 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 NR2F6P10588 404 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 PF4V1P10720 104 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SKILP12757 684 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 PORP16435 677 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 DDCP20711 480 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MSNP26038 577 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 PSMB6P28072 239 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 AKT1P31749 480 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ECI1P42126 302 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SLC1A1P43005 524 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GLP1RP43220 463 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SYKP43405 635 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 HOXA1P49639 335 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 CEBPDP49716 269 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 DIO1P49895 249 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RORCP51449 518 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ALDH3A2P51648 485 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 HNRNPA3P51991 378 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 PSMD4P55036 377 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 GNB2P62879 340 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RAE1P78406 368 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 BTN3A2P78410 334 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ZNF816Q0VGE8 651 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 RAB40BQ12829 278 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SLC13A2Q13183 592 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CBFBQ13951 182 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DECR1Q16698 335 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GSG1Q2KHT4 349 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DPY19L1Q2PZI1 675 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 HIKESHIQ53FT3 197 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SOHLH1Q5JUK2 328 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 FAM209BQ5JX69 171 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 C6orf10Q5SRN2 563 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 AVPI1Q5T686 147 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 C6orf163Q5TEZ5 329 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 METTL11BQ5VVY1 283 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RGS7BPQ6MZT1 257 aaPredicted RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 FAM45BPQ6NSW5 357 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 GDPD3Q7L5L3 318 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CHMP1BQ7LBR1 199 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TCF24Q7RTU0 167 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TCF23Q7RTU1 214 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SPATA12Q7Z6I5 190 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 THOC6Q86W42 341 aaKnown RBP0.24□□□□□ -2.37
CEP290-203ENST00000547691 ZDHHC21Q8IVQ6 265 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 ZNF619Q8N2I2 560 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 STPG2Q8N412 459 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 TCTEX1D1Q8N7M0 179 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 NECAB1Q8N987 351 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 SCAIQ8N9R8 606 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 CSNK1G2-AS1Q8NCQ2 148 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 DMBX1Q8NFW5 382 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 MFSD8Q8NHS3 518 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 FAM45AQ8TCE6 357 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RAPGEF5Q92565 580 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 P3H4Q92791 437 aa0.24□□□□□ -2.37
CEP290-203ENST00000547691 RAB8BQ92930 207 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms