RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 NUDT6P53370 316 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 HCCSP53701 268 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 LSM6P62312 80 aaKnown RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PSG4Q00888 419 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 TGFBR3Q03167 851 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 GLO1Q04760 184 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 KLHL12Q53G59 568 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CCDC92Q53HC0 331 aaPredicted RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 TEX30Q5JUR7 227 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC18B1Q6NT16 456 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CORO6Q6QEF8 472 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 MDP1Q86V88 176 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 DEPDC4Q8N2C3 294 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 LRRC18Q8N456 261 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 RFLNBQ8N5W9 214 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CPEB3Q8NE35 698 aaKnown RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 OR52N5Q8NH56 324 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 ST7LQ8TDW4 575 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 OTULINQ96BN8 352 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PLEKHA8Q96JA3 519 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 APOL4Q9BPW4 351 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF649Q9BS31 505 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 TEX12Q9BXU0 123 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PRRG3Q9BZD7 231 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 WNT5BQ9H1J7 359 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 MRPS18AQ9NVS2 196 aaKnown RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CRIM1Q9NZV1 1036 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PAIP2BQ9ULR5 123 aaKnown RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CEPT1Q9Y6K0 416 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 A1L4Q6 167 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF593O00488 134 aaPredicted RBP9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF14P17017 642 aaPredicted RBP9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF32P17041 273 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ANOS1P23352 680 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 FMO3P31513 532 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 TTKP33981 857 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 CDH11P55287 796 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 IL5RAQ01344 420 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF91Q05481 1191 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 PIGFQ07326 219 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 KRTAP27-1Q3LI81 207 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 DNM1P34Q6PK57 102 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 CFAP77Q6ZQR2 320 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 THAP5Q7Z6K1 395 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 P2RY8Q86VZ1 359 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 LINC00346Q8IVM7 164 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 OR6K6Q8NGW6 343 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 HSD17B8Q92506 261 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 MS4A3Q96HJ5 214 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 C1QTNF6Q9BXI9 259 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 AMBNQ9NP70 447 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 PALMDQ9NP74 551 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 OBP2BQ9NPH6 170 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 ASH2LQ9UBL3 628 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 WARS2Q9UGM6 360 aaKnown RBP9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 KCNG2Q9UJ96 466 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 COPS3Q9UNS2 423 aa9.29□□□□□ -0.92
NPIPB3-210ENST00000542817 POLQO75417 2590 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 IGHV1-18A0A0C4DH31 117 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 OR6C6A6NF89 314 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC22A31A6NKX4 558 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 DEFB108AA8MXU0 73 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 RER1O15258 196 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 MPZL2O60487 215 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 APOL3O95236 402 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 MRPL3P09001 348 aaKnown RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SBK2P0C263 348 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 CBR1P16152 277 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 PPP3CBP16298 524 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF12P17014 697 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 ALOX5APP20292 161 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 CENPAP49450 140 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 ENTPD1P49961 510 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 RAB1AP62820 205 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 MVKQ03426 396 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 PPA1Q15181 289 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 MEDAGQ5VYS4 303 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SHFQ7M4L6 423 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SSX6Q7RTT6 188 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC16A14Q7RTX9 510 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 DPY19L4Q7Z388 723 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SYT9Q86SS6 491 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 CDC20BQ86Y33 519 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 GID4Q8IVV7 300 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 C8orf59Q8N0T1 100 aaPredicted RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 PAQR4Q8N4S7 273 aaPredicted RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 FAM169BQ8N8A8 192 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SETD9Q8NE22 299 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 OR4F15Q8NGB8 312 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 AKR7LQ8NHP1 331 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 SGCDQ92629 289 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 RNF166Q96A37 237 aaPredicted RBP9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 LGALS12Q96DT0 336 aa9.28□□□□□ -0.92
NPIPB3-210ENST00000542817 INTS14Q96SY0 518 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms