RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZNF813Q6ZN06 617 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 Q6ZRG5 221 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 ANGPTL5Q86XS5 388 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 GJC3Q8NFK1 279 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 OR10J5Q8NHC4 309 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 LIPHQ8WWY8 451 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SYT11Q9BT88 431 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 PCED1AQ9H1Q7 454 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 ZMAT3Q9HA38 289 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 XRCC3O43542 346 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 CSF3P09919 207 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 CD80P33681 288 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SUB1P53999 127 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 UBE2G1P62253 170 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 TAF9Q16594 264 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 PTRH1Q86Y79 214 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SCCPDHQ8NBX0 429 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 OR51A2Q8NGJ7 313 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 HSFX1Q9UBD0 423 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 PPP1R3CQ9UQK1 317 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 MMACHCQ9Y4U1 282 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 BCAT2O15382 392 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 CHRM2P08172 466 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SLC35E2P0CK97 266 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 DTYMKP23919 212 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 RAB1AP62820 205 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 HES1Q14469 280 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 TAZQ16635 292 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 AFMIDQ63HM1 303 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF626Q68DY1 528 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 OR2L13Q8N349 312 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 EXD3Q8N9H8 876 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 OR51S1Q8NGJ8 323 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 ISL2Q96A47 359 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SLC35A4Q96G79 324 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 MED9Q9NWA0 146 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 CRYM-AS1A6NIL9 109 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SEMA6CQ9H3T2 930 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 AKIRIN1Q9H9L7 192 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 MT-ATP6P00846 226 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CALCBP10092 127 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ARNTP27540 789 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SLC35A2P78381 396 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 VWA1Q6PCB0 445 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 PRSS45Q7RTY3 260 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 RLN3Q8WXF3 142 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 EDEM2Q9BV94 578 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 TAAR5O14804 337 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 NME2P1O60361 137 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 LBX1P52954 281 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 RPL11P62913 178 aaKnown RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 IHHQ14623 411 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CHST8Q9H2A9 424 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 DUSP13Q9UII6 198 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF98A6NK75 572 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF724A8MTY0 619 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 PRKRAO75569 313 aaKnown RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SOD1P00441 154 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 F2RP25116 425 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM183BQ1AE95 376 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SLC48A1Q6P1K1 146 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 RELL2Q8NC24 303 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 NECAP1Q8NC96 275 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 GPR119Q8TDV5 335 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ARHGDIGQ99819 225 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 B3GALT5Q9Y2C3 310 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 MN1Q10571 1320 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SLC5A10A0PJK1 596 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CNIH1O95406 144 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 PKIAP61925 76 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SELENBP1Q13228 472 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF620Q6ZNG0 422 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 NANOGP1Q8N7R0 232 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SLC35D1Q9NTN3 355 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 FLVCR2Q9UPI3 526 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 PDE4DIPQ5VU43 2346 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 OR6C68A6NDL8 312 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CCSO14618 274 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 CNMDO75829 334 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 GRPP07492 148 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 NTF3P20783 257 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
COL4A6-208ENST00000538570 FAM71CQ8NEG0 241 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SLC25A46Q96AG3 418 aa9.12□□□□□ -0.95
COL4A6-208ENST00000538570 SEH1LQ96EE3 360 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms