RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 OPTCQ9UBM4 332 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 C19orf53Q9UNZ5 99 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SLC12A4Q9UP95 1085 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TRAPPC4Q9Y296 219 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 KLK5Q9Y337 293 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 DTNAQ9Y4J8 743 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 FAT2Q9NYQ8 4349 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 A0A087WV62 115 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 K7EPI3 171 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 UPK1AO00322 258 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 XRCC3O43542 346 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 ZNF500O60304 480 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 OR10H3O60404 316 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 SERPINA5P05154 406 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CD55P08174 381 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 IL3P08700 152 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PATE4P0C8F1 98 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PRPS2P11908 318 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 IRF2P14316 349 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PAX6P26367 422 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 FKBP2P26885 142 aaKnown RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 GABRB3P28472 473 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 TYK2P29597 1187 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 LCN1P31025 176 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PRKAR1BP31321 381 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CLK1P49759 484 aaKnown RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 NPY4RP50391 375 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 AQP5P55064 265 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CLDN17P56750 224 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 H3F3AP84243 136 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 KLRD1Q13241 179 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 SNX1Q13596 522 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CEACAM7Q14002 265 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PTGR1Q14914 329 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 OR7A5Q15622 319 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CDONQ4KMG0 1287 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PLA1AQ53H76 456 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 TEX35Q5T0J7 233 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 LIPJQ5W064 366 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CARD17Q5XLA6 110 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 LGALS9CQ6DKI2 356 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 ZNF770Q6IQ21 691 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 C16orf89Q6UX73 402 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CREB3L2Q70SY1 520 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 GSTA5Q7RTV2 222 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 TMEM219Q86XT9 240 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 SGPP2Q8IWX5 399 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 Q8N2B8 174 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PAQR4Q8N4S7 273 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 KLHL30-AS1Q8NEE0 82 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 VPS37AQ8NEZ2 397 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CDC26Q8NHZ8 85 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 VANGL1Q8TAA9 524 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 ZNF420Q8TAQ5 688 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 ITLN1Q8WWA0 313 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PMM1Q92871 262 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 ATP6V1E2Q96A05 226 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 DDIT4LQ96D03 193 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 OTUB1Q96FW1 271 aaPredicted RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 ATF6BQ99941 703 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 FAM110AQ9BQ89 295 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 PPP1R3EQ9H7J1 279 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 KCNK9Q9NPC2 374 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 A4GALTQ9NPC4 353 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 CTPS2Q9NRF8 586 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 ACER3Q9NUN7 267 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 NDE1Q9NXR1 346 aa3.09□□□□□ -1.91
YBX3-205ENST00000536107 EIF3KQ9UBQ5 218 aaKnown RBP3.09□□□□□ -1.91
YBX3-205ENST00000536107 IGHV3-64DA0A0J9YX35 117 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ZCWPW2A0A1B0GU75 182 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 GNG14A0A1W2PPG7 69 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ELOVL7A1L3X0 281 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 TRIM64CA6NLI5 447 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 EPM2AB3EWF7 344 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 SUPT3HB4E1H0 165 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 H0YIV9 168 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 H3BSH0 61 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 IFNL4K9M1U5 179 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 EIF4E2O60573 245 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 SUPT3HO75486 399 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 NKX2-2O95096 273 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 HSPA4LO95757 839 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 PTHP01270 115 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 GPIP06744 558 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 SPARCP09486 303 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 UBTFL6P0CB48 400 aaPredicted RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 G6PDP11413 515 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 B4GALT1P15291 398 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 TSPAN8P19075 237 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 FASP25445 335 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 MPV17P39210 176 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ACAA2P42765 397 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 KCNJ1P48048 391 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 CCNG1P51959 295 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms