RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PIK3IP1Q96FE7 263 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 PPP1R36Q96LQ0 422 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 TSNAXQ99598 290 aaKnown RBP2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 MRPS26Q9BYN8 205 aaKnown RBP2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 METTL8Q9H825 291 aaKnown RBP2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 AMBNQ9NP70 447 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM9BQ9NQ34 198 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 PLCXD1Q9NUJ7 323 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 PLEKHJ1Q9NW61 149 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR1A1Q9P1Q5 309 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 FBXL3Q9UKT7 428 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 CFL2Q9Y281 166 aa2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 ARHGEF17Q96PE2 2063 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P22-201ENST00000505315 USP42Q9H9J4 1324 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 FHOD3Q2V2M9 1422 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 IGHV1OR21-1A0A087WYE8 117 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 KIR2DL5BA0A0G2JN68 375 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 KIR2DL5BA0A0G2JPC4 375 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SYCE1LA8MT33 242 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 FOXI3A8MTJ6 420 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF487B1APH4 448 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM114B3SHH9 223 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 LRRN3E7EW58 273 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 E9PAM4 449 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 M0QZ92 97 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 PLPP3O14495 311 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 GPR171O14626 319 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SLC16A4O15374 487 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 ATP8B1O43520 1251 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 IDH3BO43837 385 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CDC40O60508 579 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 BMP15O95972 392 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TOMM40O96008 361 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 HPRT1P00492 218 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 IGHG1P01857 330 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 IFNA6P05013 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A6P0DMU7 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A5P0DMU8 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A10P0DMU9 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A7P0DMV0 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 COX5BP10606 129 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 NQO1P15559 274 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAB4AP20338 218 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 FMO3P31513 532 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 NR4A2P43354 598 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 HCCSP53701 268 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 LINC01547P58512 204 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 HMGCS1Q01581 520 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 GLO1Q04760 184 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SMARCB1Q12824 385 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SIX1Q15475 284 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR7A5Q15622 319 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TRAM1Q15629 374 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 LTB4RQ15722 352 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A1Q5HYN5 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SPSB3Q6PJ21 355 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 PRSS57Q6UWY2 283 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 WDR82Q6UXN9 313 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 GDPGP1Q6ZNW5 385 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 HIPK1Q86Z02 1210 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 FAM71AQ8IYT1 594 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 KIR2DL5AQ8N109 375 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CADM2Q8N3J6 435 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZFP41Q8N8Y5 198 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 LFNGQ8NES3 379 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR4K2Q8NGD2 314 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR2A12Q8NGT7 310 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR2A1Q8NGT9 310 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR2Y1Q8NGV0 311 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 KIR2DL5BQ8NHK3 375 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CT45A3Q8NHU0 189 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 DNASE2BQ8WZ79 361 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CDS1Q92903 461 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM54Q969K7 222 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM230Q96A57 120 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 FLYWCH2Q96CP2 140 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 GMPPAQ96IJ6 420 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 HIST1H4GQ99525 98 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 VAT1Q99536 393 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 RSG1Q9BU20 258 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SRXN1Q9BYN0 137 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 PORCNQ9H237 461 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CLMPQ9H6B4 373 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 RPF2Q9H7B2 306 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF442Q9H7R0 627 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 DDX31Q9H8H2 851 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 TRIM45Q9H8W5 580 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 REEP1Q9H902 201 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 EXOSC4Q9NPD3 245 aaKnown RBP2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CALYQ9NYX4 217 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CYB5R1Q9UHQ9 305 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 CES1P1Q9UKY3 287 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 SNX24Q9Y343 169 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 COX11Q9Y6N1 276 aa2.94□□□□□ -1.94
HMGB1P22-201ENST00000505315 PLB1Q6P1J6 1458 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 IGHV4-30-2A0A087WSY4 118 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 RPL37AP8A6NKH3 93 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 PMS2P5A8MQ11 134 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 SLCO1B7G3V0H7 640 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms