RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SMARCD3Q6STE5 483 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 DPY19L2P2Q6ZN68 376 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-212ENST00000493940 ZDHHC21Q8IVQ6 265 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 OR6V1Q8N148 313 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 OR9Q2Q8NGE9 314 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 FNDC8Q8TC99 324 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 RDH5Q92781 318 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 CLPTM1LQ96KA5 538 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 SAMD8Q96LT4 415 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 NSMCE2Q96MF7 247 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 ERMAPQ96PL5 475 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-212ENST00000493940 DDOQ99489 341 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 BTBD10Q9BSF8 475 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 OR52D1Q9H346 318 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 FN3KQ9H479 309 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 SRA1Q9HD15 236 aaKnown RBP10.73□□□□□ -0.69
HSPG2-212ENST00000493940 HINT3Q9NQE9 182 aaKnown RBP10.73□□□□□ -0.69
HSPG2-212ENST00000493940 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 DCAF16Q9NXF7 216 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 FAM53CQ9NYF3 392 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 FBXO9Q9UK97 447 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-212ENST00000493940 AURKCQ9UQB9 309 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 STARD10Q9Y365 291 aa10.73□□□□□ -0.69
HSPG2-212ENST00000493940 RER1O15258 196 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ENTPD5O75356 428 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 DCTN3O75935 186 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 IGHV1-46P01743 117 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 FABP3P05413 133 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 GAAP10253 952 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 PSKH1P11801 424 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 HIST1H1CP16403 213 aaKnown RBP10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ACHEP22303 614 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 HMGA2P52926 109 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 PPP1CBP62140 327 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 PSG7Q13046 419 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ZNF718Q3SXZ3 478 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ZNF362Q5T0B9 420 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ZNF770Q6IQ21 691 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-212ENST00000493940 FAM166AQ6J272 317 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 C1orf94Q6P1W5 598 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 PGBD2Q6P3X8 592 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 CORO6Q6QEF8 472 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 Q6ZR03 302 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 SYT9Q86SS6 491 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ZNF540Q8NDQ6 660 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 OR4C15Q8NGM1 316 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 OR8D4Q8NGM9 314 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 ABHD4Q8TB40 342 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 TMEM158Q8WZ71 300 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 NSL1Q96IY1 281 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 C4orf45Q96LM5 186 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 NMNAT3Q96T66 252 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 EGLN3Q9H6Z9 239 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 B9D1Q9UPM9 204 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 LYVE1Q9Y5Y7 322 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 LHFPL6Q9Y693 200 aa10.72□□□□□ -0.69
HSPG2-212ENST00000493940 OR6C68A6NDL8 312 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 C12orf71A8MTZ7 269 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 XKRYO14609 159 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 SGCEO43556 437 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 SPRY3O43610 288 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 AHCYL1O43865 530 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 OR10H3O60404 316 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 DOK2O60496 412 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 KHDRBS3O75525 346 aaKnown RBP10.71□□□□□ -0.69
HSPG2-212ENST00000493940 GASTP01350 101 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 TFP02787 698 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 ERCC1P07992 297 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-212ENST00000493940 FAM157CP0CG43 387 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 GPR6P46095 362 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-212ENST00000493940 CHN2P52757 468 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 CDH15P55291 814 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 HIST1H3AP68431 136 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 MXRA7P84157 204 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 KCNMB1Q16558 191 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 CR1LQ2VPA4 569 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 SLC35F1Q5T1Q4 408 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 AVPI1Q5T686 147 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 HIST2H3PS2Q5TEC6 136 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 MBNL2Q5VZF2 373 aaKnown RBP10.71□□□□□ -0.69
HSPG2-212ENST00000493940 GPR139Q6DWJ6 353 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 C16orf89Q6UX73 402 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 HIST2H3AQ71DI3 136 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-212ENST00000493940 OR4K13Q8NH42 304 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 BEX2Q9BXY8 128 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 PLA2G12AQ9BZM1 189 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 LRMDAQ9H2I8 198 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 MSL2Q9HCI7 577 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 NKIRAS2Q9NYR9 191 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 TAS2R1Q9NYW7 299 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 ACTR3BQ9P1U1 418 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 CDC42EP3Q9UKI2 254 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 GRIP1Q9Y3R0 1128 aa10.71□□□□□ -0.69
HSPG2-212ENST00000493940 OR6C6A6NF89 314 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 ARPC3O15145 178 aa10.7□□□□□ -0.7
HSPG2-212ENST00000493940 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
HSPG2-212ENST00000493940 GMNNO75496 209 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms