RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	SOX2	P48431	317 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SULT1A2	P50226	295 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	PGD	P52209	483 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	CD81	P60033	236 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	RPS4X	P62701	263 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	RAB1A	P62820	205 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ADAM8	P78325	824 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	BTN3A2	P78410	334 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	NTHL1	P78549	312 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	IL13RA1	P78552	427 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	HTRA3	P83110	453 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	CDK3	Q00526	305 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ELOC	Q15369	112 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MST1L	Q2TV78	715 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	GFOD2	Q3B7J2	385 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	RNASE10	Q5GAN6	216 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	FAM76B	Q5HYJ3	339 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	DNLZ	Q5SXM8	178 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ARHGAP40	Q5TG30	622 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TMEM215	Q68D42	235 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ZNF425	Q6IV72	752 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SLC16A13	Q7RTY0	426 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	NUP54	Q7Z3B4	507 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	DEFB132	Q7Z7B7	95 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TMED4	Q7Z7H5	227 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ADGRE4P	Q86SQ3	457 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ZNF584	Q8IVC4	421 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ZFP82	Q8N141	532 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SLC39A11	Q8N1S5	342 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	EXD3	Q8N9H8	876 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	WDSUB1	Q8N9V3	476 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	OR2L3	Q8NG85	312 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	OR13C8	Q8NGS7	320 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	OR8S1	Q8NH09	359 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ADAMTS17	Q8TE56	1095 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	GRHL3	Q8TE85	626 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TSEN15	Q8WW01	171 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	LIPH	Q8WWY8	451 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	OIT3	Q8WWZ8	545 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ASB17	Q8WXJ9	295 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	DCUN1D4	Q92564	292 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	RSC1A1	Q92681	617 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	HOXB13	Q92826	284 aa	Predicted RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	FGF13	Q92913	245 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	HIST1H2BA	Q96A08	127 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TMEM106A	Q96A25	262 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ARRDC3	Q96B67	414 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SGK3	Q96BR1	496 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SEH1L	Q96EE3	360 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SLC41A2	Q96JW4	573 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	C4orf45	Q96LM5	186 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SCGB3A2	Q96PL1	93 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	AQP10	Q96PS8	301 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TAAR9	Q96RI9	348 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	NMNAT3	Q96T66	252 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ELF4	Q99607	663 aa	Predicted RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MICU1	Q9BPX6	476 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	TIMM29	Q9BSF4	260 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SLC46A2	Q9BY10	475 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	LMAN2L	Q9H0V9	348 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MS4A5	Q9H3V2	200 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	OPA3	Q9H6K4	179 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	WDR76	Q9H967	626 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	LYRM4	Q9HD34	91 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ACKR4	Q9NPB9	350 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ADAP2	Q9NPF8	381 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	GPR27	Q9NS67	375 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	FLRT3	Q9NZU0	649 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	PPP4R1L	Q9P1A2	415 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	USP36	Q9P275	1121 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	LPAR3	Q9UBY5	353 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MIOX	Q9UGB7	285 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SLC23A2	Q9UGH3	650 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MRM2	Q9UI43	246 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	LAMP5	Q9UJQ1	280 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	CSAG2	Q9Y5P2	127 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	HEBP2	Q9Y5Z4	205 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	SPACA6	W5XKT8	324 aa		4.63	□□□□□ -1.67
CREM-238	ENST00000488741	MDC1	Q14676	2089 aa	Known RBP	4.63	□□□□□ -1.67
CREM-238	ENST00000488741	CENPVL1	A0A0U1RR11	272 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741		A0A1W2PS29	197 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	TMEM72	A0PK05	275 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	C5orf51	A6NDU8	294 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	OR6C76	A6NM76	312 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	DBX1	A6NMT0	343 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.62	□□□□□ -1.67
CREM-238	ENST00000488741		H3BS24	57 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741		M0QYG6	137 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	AP4M1	O00189	453 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	PEX12	O00623	359 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	RPP14	O95059	124 aa	Known RBP	4.62	□□□□□ -1.67
CREM-238	ENST00000488741	FARS2	O95363	451 aa	Known RBP	4.62	□□□□□ -1.67
CREM-238	ENST00000488741	REN	P00797	406 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	IFNA17	P01571	189 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	CD2	P06729	351 aa		4.62	□□□□□ -1.67
CREM-238	ENST00000488741	DCN	P07585	359 aa	Known RBP	4.62	□□□□□ -1.67
CREM-238	ENST00000488741	NGFR	P08138	427 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms