RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 GP1BBP13224 206 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 FOXL2P58012 376 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PDZK1IP1Q13113 114 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 NFATC4Q14934 902 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 FAM76BQ5HYJ3 339 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 C11orf87Q6NUJ2 197 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 FJX1Q86VR8 437 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 FBXO17Q96EF6 278 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 FAM71F1Q96KD3 344 aaPredicted RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 CNTNAP3BQ96NU0 1288 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 MAP3K3Q99759 626 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 LYRM4Q9HD34 91 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 MMP25Q9NPA2 562 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 UBQLN4Q9NRR5 601 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 TUBAL3A6NHL2 446 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 EFCAB7A8K855 629 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 SDCBPO00560 298 aaPredicted RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 ALOX5APP20292 161 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 SERPINF1P36955 418 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 KCNJ3P48549 501 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 EBPQ15125 230 aaKnown RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 PAN3Q58A45 887 aaKnown RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 TMEM196Q5HYL7 178 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PARM1Q6UWI2 310 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PUSL1Q8N0Z8 303 aaKnown RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 PRSS35Q8N3Z0 413 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 ROBO4Q8WZ75 1007 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 ARL11Q969Q4 196 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PLEKHA1Q9HB21 404 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 DHCR7Q9UBM7 475 aaKnown RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 HHLA2Q9UM44 414 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 ARPC3O15145 178 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 BET1O15155 118 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 UTS2O95399 124 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 PNMTP11086 282 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 NFYBP25208 207 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 FMODQ06828 376 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 MFGE8Q08431 387 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 TMEM225Q6GV28 225 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 NAXDQ8IW45 347 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 OR6K3Q8NGY3 331 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 BAHD1Q8TBE0 780 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC25A32Q9H2D1 315 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 LHX6Q9UPM6 363 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 TMEM150CB9EJG8 249 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC17A2O00624 439 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 AHSA1O95433 338 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 HPP00738 406 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 CHAF1BQ13112 559 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 NR0B2Q15466 257 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ALG11Q2TAA5 492 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 DCXRQ7Z4W1 244 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 OR13H1Q8NG92 308 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 OR4K17Q8NGC6 315 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 NT5CQ8TCD5 201 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 RLN3Q8WXF3 142 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF175Q9Y473 711 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 KIAA1671Q9BY89 1806 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 LOC107986453A0A1B0GWG9 222 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF98A6NK75 572 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF878C9JN71 531 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 TXNL1O43396 289 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 SGCEO43556 437 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ADAP1O75689 374 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 TNFP01375 233 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF20P17024 532 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 AKT2P31751 481 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 KIR3DL2P43630 455 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 PPT1P50897 306 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ELOCQ15369 112 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 PLEKHN1Q494U1 663 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 FHL5Q5TD97 284 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ACOT7LQ6ZUV0 252 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF587Q96SQ5 575 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 SLC22A11Q9NSA0 550 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF701Q9NV72 531 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 ZNF629Q9UEG4 869 aaPredicted RBP11.47□□□□□ -0.57
VPS52-218ENST00000482399 AUP1Q9Y679 476 aa11.47□□□□□ -0.57
VPS52-218ENST00000482399 LINC01553A4QN01 128 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 NPIPA5E9PKD4 350 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 PRH1P02810 166 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 CSF2RBP32927 897 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 PRMT2P55345 433 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 SLC17A1Q14916 467 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 TFAP2EQ6VUC0 442 aa11.46□□□□□ -0.57
VPS52-218ENST00000482399 C16orf47Q6ZP98 133 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms