RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NKX2-2O95096 273 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 LCKP06239 509 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ACP2P11117 423 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 CD79AP11912 226 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 CCL2P13500 99 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 HOXB9P17482 250 aaPredicted RBP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 SLC6A1P30531 599 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 LCN1P31025 176 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 STX2P32856 288 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 PMELP40967 661 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 NPY4RP50391 375 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 UBE2E1P51965 193 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 OR2B6P58173 313 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 RPL23AP62750 156 aaKnown RBP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 TNFAIP6P98066 277 aaPredicted RBP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 EWSR1Q01844 656 aaKnown RBP eCLIP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ACSM1Q08AH1 577 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 PMS2P3Q13401 168 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 TGFBIQ15582 683 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 CCNG2Q16589 344 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 CDKL4Q5MAI5 379 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 HCP5Q6MZN7 132 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF782Q6ZMW2 699 aaPredicted RBP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 Q6ZR03 302 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 OR2W3Q7Z3T1 314 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 PRUNE1Q86TP1 453 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 TMEM99Q8N816 258 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 LY6G5BQ8NDX9 201 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 OR52H1Q8NGJ2 320 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ST8SIA1Q92185 356 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 AMDHD1Q96NU7 426 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 EGFL8Q99944 293 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 FAM110AQ9BQ89 295 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF649Q9BS31 505 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 OSBPL8Q9BZF1 889 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 HSD3B7Q9H2F3 369 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 CYSLTR2Q9NS75 346 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 ACER3Q9NUN7 267 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CXorf65A6NEN9 183 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 VGLL3A8MV65 326 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF99A8MXY4 864 aaPredicted RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 C16orf90A8MZG2 172 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CCL24O00175 119 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 OR10H3O60404 316 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SNAP29O95721 258 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 NUDT14O95848 222 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ALDOCP09972 364 aaKnown RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 GP9P14770 177 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ETS1P14921 441 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CHN1P15882 459 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SPNP16150 400 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 EEF1B2P24534 225 aaKnown RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SOX2P48431 317 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CENPAP49450 140 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 PRKAA2P54646 552 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 FAM3BP58499 235 aaPredicted RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SLC35A1P78382 337 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 MERTKQ12866 999 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 KLRD1Q13241 179 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ALKBH1Q13686 389 aaKnown RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 TSNQ15631 228 aaKnown RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CEACAM16Q2WEN9 425 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 FAM201AQ5SY85 155 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 THEM4Q5T1C6 240 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CCNYL2Q5T2Q4 361 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 LIPMQ5VYY2 423 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ARMC3Q5W041 872 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 AADACL2Q6P093 401 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 LINC00322Q6ZN03 302 aaPredicted RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 VRK2Q86Y07 508 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SLC26A10Q8NG04 563 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 OR52N4Q8NGI2 321 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 MGARPQ8TDB4 240 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 ANKRD49Q8WVL7 239 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CTNNBL1Q8WYA6 563 aaPredicted RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 RNFT2Q96EX2 444 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 LYZL4Q96KX0 146 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 NAA11Q9BSU3 229 aaPredicted RBP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 OR51B6Q9H340 312 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 GOLPH3Q9H4A6 298 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 NRIP3Q9NQ35 241 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 NANSQ9NR45 359 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 SERINC1Q9NRX5 453 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 CHRNA9Q9UGM1 479 aa4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.05□□□□□ -1.76
SBDSP1-204ENST00000453858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.05□□□□□ -1.765e-7■■■■□ 25.2
SBDSP1-204ENST00000453858 AGRNO00468 2067 aa4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 PLSCR5A0PG75 271 aa4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 MACROD2A1Z1Q3 448 aa4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 NCF1BA6NI72 391 aaPredicted RBP4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 TTC36A6NLP5 189 aa4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 NCF1CA8MVU1 366 aaPredicted RBP4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 KRTAP29-1A8MX34 341 aaPredicted RBP4.04□□□□□ -1.76
SBDSP1-204ENST00000453858 MCIDASD6RGH6 385 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms