RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CHD1O14646 1710 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 FAM166BA8MTA8 275 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PHF1O43189 567 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 GLCEO94923 617 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ADH1BP00325 375 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PI3P19957 117 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 BCKDHBP21953 392 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 RGRP47804 291 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PNRC1Q12796 327 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 TMEM184AQ6ZMB5 413 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 MISPQ8IVT2 679 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 DND1Q8IYX4 353 aaKnown RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 CMTM8Q8IZV2 173 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 SGCZQ96LD1 299 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ULBP3Q9BZM4 244 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 TMEM9BQ9NQ34 198 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 OR52A1Q9UKL2 312 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 RPH3ALQ9UNE2 315 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 FOXJ3Q9UPW0 622 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 KIF1AQ12756 1690 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 SLC5A10A0PJK1 596 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 NPIPB9F8W1W9 429 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 SELENOFO60613 162 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 SCD5Q86SK9 330 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 ACOT4Q8N9L9 421 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 OR10A7Q8NGE5 316 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 FBLIM1Q8WUP2 373 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 ZNF286AQ9HBT8 521 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 MRPS28Q9Y2Q9 187 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 AMDHD2Q9Y303 409 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 SEMA7AO75326 666 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 GCGP01275 180 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 TK1P04183 234 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 PGCP20142 388 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 DOC2BQ14184 412 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 GAMTQ14353 236 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 MCHR2Q969V1 340 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 HIST1H2BAQ96A08 127 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 UBL7Q96S82 380 aaPredicted RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 PARP4Q9UKK3 1724 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 TP53I11O14683 189 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 GEMIN2O14893 280 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 CLN5O75503 358 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 CLEC3AO75596 197 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 HLA-DQB1P01920 261 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 HRH1P35367 487 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 THBS2P35442 1172 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 ARRB1P49407 418 aaPredicted RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 LIM2P55344 173 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 HNRNPKP61978 463 aaKnown RBP eCLIP9.44□□□□□ -0.9
LIN54-202ENST00000442461 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 MEP1BQ16820 701 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 PDLIM3Q53GG5 364 aaPredicted RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 FAM219BQ5XKK7 198 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 DPY19L2P2Q6ZN68 376 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 GPR142Q7Z601 462 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 ORAI1Q96D31 301 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 LMF2Q9BU23 707 aaKnown RBP9.44□□□□□ -0.9
LIN54-202ENST00000442461 SLC23A2Q9UGH3 650 aa9.44□□□□□ -0.9
LIN54-202ENST00000442461 CRYBG1Q9Y4K1 1723 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 A0A1W2PNV4 684 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 DRGXA6NNA5 263 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TMEM189-UBE2V1I3L0A0 370 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TRAPPC6AO75865 159 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 CTSAP10619 480 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 SFTPCP11686 197 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 USF1P22415 310 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 AADACP22760 399 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 DPP4P27487 766 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ACTR1BP42025 376 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ACTR1AP61163 376 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 CEBPEQ15744 281 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TMEM225Q6GV28 225 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 OLIG3Q7RTU3 272 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TMPRSS7Q7RTY8 843 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 SIRT6Q8N6T7 355 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 EXD3Q8N9H8 876 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 MOB1AQ9H8S9 216 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 OR14J1Q9UGF5 321 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 KLF15Q9UIH9 416 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ARL2-SNX15V9GYD0 113 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ZFC3H1O60293 1989 aaKnown RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 FZD6O60353 706 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 CTNSO60931 367 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 IGHA1P01876 353 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 DIO1P49895 249 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 CARD18P57730 90 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 MLF1P58340 268 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 BRICD5Q6PL45 260 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PGBD5Q8N414 524 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TP53RKQ96S44 253 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms